Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4129 |
Symbol | |
ID | 8227727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4985657 |
End bp | 4988134 |
Gene Length | 2478 bp |
Protein Length | 825 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644931972 |
Product | ATP-dependent protease La |
Protein accession | YP_003088497 |
Protein GI | 255037876 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.170203 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGACT CGGACATGGA TAGCCTCGAA ATCGTTCCAC TTGGCGGCCC CGATGGCTCC GACGAGCCTT TTGAACTTCC CAATGAATTA GCGATACTTC CTATCAGGCA AACAGTACTT TTTCCCGGAA TGGTTATTCC GGTAACCGTA GTGCGCCAGA AAGCCATCCG GCTTGTTAAA AAGATATACC GTAATTCCGA CATCAATCAG CGTATTCTCG GTGCCGTCAC CCAGGCGATC CCCAACAAGG AAGACCCTAC GGCCGAGGAC CTTTACAACA TCGGTACCGT TGCCCAGATC CTGAAAATGA TTACCCTGCC GGATGGCAAT GTAACCATCA TCGTTCAAGG CCGGCAGCGC TTCGAGATCA AGTCGATTGT GAACGAAGAG CCTTACCTTA CTGCCGAGGT GCGGGCGATC GAGGATTCAT TTGTGGGGCC TACCAAAAAA GAAGCGAAAG CACTGCTGCA ATCGCTTCGT GACGGCGCGC ACAAGATCAT GCGCCTGAAC CCGGAGATCC CGCAGGAAGC GCGCATTGCC CTCGATAACA TTGAAAGTCC GATATTCCTG ATCCATTTCC TGTCGTCGAA CATCAATGTA GAAGTAGCCG ACAAGCAAAA GCTGCTTGAA GAGCGCAATG GCCATAAGCA AGCCACGCTT TTGCTGCAAT ACATGATGCG GGAAATCGAA ATGCTCGAAC TAAAACGGGA AATCCAGACC AAAGCCAGCT CGGACATCGA CCAGCAACAG CGCGACTATT TCCTGCGCCA GCAGATCAAG GTGCTGCACG ATGAGCTGGG CATGGACAGC CCCGAGCGCG ACCTGGACGA AATACGCCTC AAAGCCAGCC AGAAAAAATG GACGGACGCG GTGAAGGCGC ATTTCGACAA AGAACTTAGC AAACTGCAAC GCATTAACCC GATGGCGCCT GAATACCCGG TAACGATGAA TTACCTGGAA ACGCTCGTGG ACCTGCCGTG GGGACAATAT ACCAAAGACA ATTTCGACCT CGTAAGAGCG CAGAAAATAC TCGACACCGA CCATTTCGGC CTCGAAAAGG TGAAGGAGCG CATTATCGAA TACCTCGCGG TGCTCAAACT GAAAGGTAAC CTCAAAGCGC CGATCCTCTG CCTCTACGGC CCTCCGGGGG TGGGTAAAAC TTCGCTCGGG AAGTCCATTG CAAAGGCGCT TAACCGCGAA TACATTCGCA TGGCGCTGGG CGGCGTGCAC GACGAAGCCG AAATCCGCGG CCACCGCAAG ACTTATATTG GCGCGATGCC CGGAAAAATC ATTCAGAACA TCAAAAAAGC AGGTTCTGCC AACCCGGTGT TCATCCTGGA TGAAATTGAT AAGGTAAGCT CCGACTACCG CGGCGATCCT TCGTCAGCTT TGCTGGAAGT ACTCGACCCC GAGCAAAACT CTTCGTTTAC AGATAATTAC CTCGAAGTAG AATACGACCT TTCGAAAGTA CTTTTCGTAG CTACCGCCAA CTCGCTCGAC ACCATCCACC CCGCATTGCG CGACCGGATG GAGATCATCG AGATGACCGG CTACACGATC GAAGAAAAAT TGCAGATCGC GAAACGTTAC CTCGTTCCGA AGCAACGCAA AGACCATGGC CTGAAAGCAA CCGACGTGAA GGTAGACGAC GCCGCATTGC TGAAAGTGAT CGAAGGCTAC ACCCGCGAAT CGGGCGTGCG CAACCTTGAA CAGAAAGTGG GGACGGTGGT GCGCAAGATC GCGAAATCGG TAGCAATGGA GCAGGATTAT CCCAAAACCA TCAAAGCCGA ACAAGTCGAA AAATACCTTG GCGCAGAGAT TTTTGATAAG GATTTGTACC AGGACAACGA CTTCGCAGGC GTTGTTACCG GCCTCGCATG GACCTCGGTA GGCGGTGAAA TATTGTTCAT CGAAACCAGC CTGAGCCGCG GCAAAGGTGG ACTGACGTTA TCCGGCCAGC TAGGCGACGT GATGAAAGAA TCGGCCGTGG CTGCATTGTC GTACCTCAAA GCCAACGCGG AACGGCTCGG CATCGACTAC CGGATTTTCA ACCATTACGA CCTGCACGTG CACGTGCCTG CGGGCGCGGT GCCCAAAGAT GGCCCGAGCG CGGGCGTAAC GATGGTCACT TCCATGGCCT CGATATTTAC ACAGCGCCGG GTGAAACCTT TCATTGCCAT GACGGGTGAG ATTACCCTGC GCGGAAAAGT GCTTCCGGTA GGCGGCGTGA AGGAAAAAAT TCTCGCAGCG CGGCGCGCGG GTGTGAAGGA GATCATTCTT TGTGTTAAAA ACCGCAAGGA CGTGGAAGAA GTACCGGCCA ACTACGTCAA AGACCTGAGC TTCCATTACG TGGATCAGAT CGACGAGGTG CTGGGTATCG CATTGCTTCC CGAGAAAGTG AACAACCCGA TGAACTTCGT TTTCCCCGAT GAGAAGAAGG AAAAAGAGGA AAGCGGGTTT GTCACAATGA CCGCATAG
|
Protein sequence | MSDSDMDSLE IVPLGGPDGS DEPFELPNEL AILPIRQTVL FPGMVIPVTV VRQKAIRLVK KIYRNSDINQ RILGAVTQAI PNKEDPTAED LYNIGTVAQI LKMITLPDGN VTIIVQGRQR FEIKSIVNEE PYLTAEVRAI EDSFVGPTKK EAKALLQSLR DGAHKIMRLN PEIPQEARIA LDNIESPIFL IHFLSSNINV EVADKQKLLE ERNGHKQATL LLQYMMREIE MLELKREIQT KASSDIDQQQ RDYFLRQQIK VLHDELGMDS PERDLDEIRL KASQKKWTDA VKAHFDKELS KLQRINPMAP EYPVTMNYLE TLVDLPWGQY TKDNFDLVRA QKILDTDHFG LEKVKERIIE YLAVLKLKGN LKAPILCLYG PPGVGKTSLG KSIAKALNRE YIRMALGGVH DEAEIRGHRK TYIGAMPGKI IQNIKKAGSA NPVFILDEID KVSSDYRGDP SSALLEVLDP EQNSSFTDNY LEVEYDLSKV LFVATANSLD TIHPALRDRM EIIEMTGYTI EEKLQIAKRY LVPKQRKDHG LKATDVKVDD AALLKVIEGY TRESGVRNLE QKVGTVVRKI AKSVAMEQDY PKTIKAEQVE KYLGAEIFDK DLYQDNDFAG VVTGLAWTSV GGEILFIETS LSRGKGGLTL SGQLGDVMKE SAVAALSYLK ANAERLGIDY RIFNHYDLHV HVPAGAVPKD GPSAGVTMVT SMASIFTQRR VKPFIAMTGE ITLRGKVLPV GGVKEKILAA RRAGVKEIIL CVKNRKDVEE VPANYVKDLS FHYVDQIDEV LGIALLPEKV NNPMNFVFPD EKKEKEESGF VTMTA
|
| |