| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4122 |
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| Symbol | |
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| ID | 8227720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4977975 |
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| End bp | 4978586 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644931965 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003088490 |
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| Protein GI | 255037869 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.911085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.605829 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACAA ACTCATTTAC CAGTACATTA CCATCGGCCT GTTCTCAGAA GGGCATTCTG
GAAACCTTGT TTGGCAGAGT GGTGACTAAC GGTGATTATA ATGCCTTCCG CGAGTTGTTT
ACCCGGCATT ACCGGTCGCT GTGCAACTAT GCCATGCGTG TGGTCGTGAC GCGCGAGATT
GCGGAGGAAG TGGTATCCGA TGTATTTGTA AAACTTTGGA AAAATCGGGA GCAGATCGAG
GTGCATACTT CATTTCAGGC TTACATTTAC AGAGCTGTGC GTAACCAGGC ACTCGATTAC
CTGAAACTGC GTATCCATCG CCAGAATGAG CGGGATTCGC TGGATTCGGT ACAGTGGAAT
ATGAGCCACG CGGATCATTT TTCACCCGCC GAGGAGCTGT CGTACAACGA ATTTTACTCG
CATATAGAAG ACTGTATCCA GGCATTGCCG CGCCAGTGCC AGCTCATTTT CCGCCTCAGC
CGCGAAGAAG GCCTCCGCTA CCGCGACATC GCAGAGCGTC TGGAAATCTC CGTCAAAACC
GTGGAAACGC AAATGAGCCG CGCATTGAAA GTCCTCCGCG AGCGCGTGCC GGAGCATAGA
TTGGTAGCAT AG
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| Protein sequence | METNSFTSTL PSACSQKGIL ETLFGRVVTN GDYNAFRELF TRHYRSLCNY AMRVVVTREI
AEEVVSDVFV KLWKNREQIE VHTSFQAYIY RAVRNQALDY LKLRIHRQNE RDSLDSVQWN
MSHADHFSPA EELSYNEFYS HIEDCIQALP RQCQLIFRLS REEGLRYRDI AERLEISVKT
VETQMSRALK VLRERVPEHR LVA
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