| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4095 |
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| Symbol | |
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| ID | 8227693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4945238 |
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| End bp | 4947880 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644931938 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_003088463 |
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| Protein GI | 255037842 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTCCA AAACTTATGC CCCTCAGGAG ATAGAGGATA AATGGTACTC CTACTGGATC
GAGAACAAGT TCTTTCAGTC GAAACCCAAT CCGGATAAAG AACCTTACAC CATCGTGATC
CCGCCGCCGA ACGTCACCGG CGTGCTGCAC ATGGGGCATA TGCTCAATAA TACCATTCAG
GACATCCTGA TCCGTAAGGC TCGGATGGAA GGCAAAGAAG CCTGCTGGGT GCCCGGCACC
GACCACGCTT CCATTGCCAC CGAAGCCAAA GTGGTGGCGA TGCTCAAAGA GCGCGGCATT
AATAAGCGCG ACCTCACGCG CGACGAATTC CTCGAATATT GCTGGGAATG GACGCACAAA
TACGGCGGCA TTATCCTGAA ACAACTTCGT AAGCTCGGCG CATCCTGCGA CTGGGACCGC
ACGCGCTTCA CAATGGAGCC GGATTTGTAC GATTCGGTGA TCGACGTTTT TATCGACCTC
TATAATAAAG GAGAAATCTA CCGCGGCCAC CGCATGGTAA ACTGGGACCC GCAGGCGCGC
ACGACGGTGT CGGACGAGGA GGTGATCATG AAGGAGGTGA ACCAGAAGCT GGTGTATCTT
CGGTATCCGC TTGTTGGAGA GGATGGAGAA GGGAGAATGG AGGAAGGGGT GACTATTGCA
ACTACCCGGC CGGAGACGAT TATGGCCGAC GTAGCGATTT GTGTAAACCC TGCAGACGAG
CGTTACCAGC ATTTGATTGG TAAAAAAGTG CTCATTCCAT TGATCAATCG GGCGATTCCG
ATTATCGCGG ATGATTATGT GGAAATGGAA TTCGGAACGG GCTGTCTGAA AGTGACGCCG
GCGCATGATA CCAATGACTA CGAGCTTGGC AAACGCCATA ACCTGCCCAT TATCGACCTG
CTCAATGAGG ATGGTACGTT AAACGACAAG GCGCAGATTC TCGTGGGCGA AGAACGTTTC
GTGGCCCGGA AGAAGATCAT CAAGCTCCTC GAAGAATCGG GTAACCTCGT GAAAGTGGAG
GAATACCGGT CGAATGTAGG GCATTCGGAG CGGACGGACT CCGTGATCGA GCCGCGGCTT
TCGGAGCAGT GGTTTTTGAG AATGGAAAAA ATCAGCAAGC CGGCATTCGA CAATGTGATG
AACGATACCG TGCAACTGAT CCCTGCGAAA TTTAAAAATA CCTACCGCCA CTGGATGGAG
AATGTGCGCG ACTGGAATAT CAGCCGCCAG CTGTGGTGGG GCCACCGCAT TCCGGCTTAC
TATCTCAACG ACGGCACGAT GATCGTCGCG AAGTCCAAGC GCGAGGCGTT GCGGAAAGCG
CAGCACGAAT ACCAGCTTTT TGCATTGACC GAAGAGGACA TTACCCAGGA CCCCGACGTG
CTGGATACCT GGTTTTCATC CTGGCTCTGG CCGATTTCGG TTTTTAATGG CATTAAAGAG
CCTGATAATG AGGAGGTTAA CTATTATTAC CCGACCAATG ACCTCGTTAC TGCTCCGGAA
ATTCTCTTCT TCTGGGTGGC GCGGATGATC ATCGCGGGTT ATGAATACCG CGGCCAGTAC
CCGTTTAAGA ACGTGTACCT GACGGGTATT GTGCGCGATA AGCAAGGCCG CAAAATGTCG
AAATCGCTGG GTAACTCGCC CGATCCGATC GACCTGATCG AAAAATATGG TGCGGATAGC
ATTCGTACCG GGATGCTTTT CAGCTCGCAG GCGGGTAACG ACTTGCCTTA CGACGAGAAG
CTGATCGAGC AGGGACGGAA TTTTGGTAAT AAAATCTGGA ATGCATTCCG TTTGGTAAAA
GGCTGGACCG TAGACAGTGA GCTGCCGGTT CCGGAAGGTT CGAAACTGGC GGTCCAATGG
TTTGAAAGTA AACTGAACCA GACATTAGCA GAAGTACAGG ACCACTTCTC GAAATTCCGC
ATTTCGGATG CATTGAATTC GGTGTACAAG CTGATCTGGG ACGATTTCTG CGCGCAGTAT
CTTGAAATGA TCAAACCCGG CTTCGAACAA CCGATCGATC TCTCGACTTA CGACTCGACG
CTCGATTTCT TCGATCGCCA GATGCGTTTG CTGCATCCAT TCATGCCGTT TATTTCCGAG
GAAATCTGGC AGAATATTAT TGAAAGGGGC GAAAAGGAGT CCATTTGCAT AGCGCATTTC
CCGCAAGCCG CGGAATTTGA TCAGTCGCTG CTGAATGATT TTGATATACT TTTTGAACTG
GTTTCGTCTA TCCGTAACCT GCGTAATTCG AAAGGCATCA GTCCGAAAAC GGCATTGCCG
CTCGCAATTC GTACCGATTC GAACGAGCGC TACAATGCAT TGACGCCGCT GATCGAAAAG
CTGGCGAATG TAGAAGGCAT TAGTTATGTA TCGGGTGAAG CGGAAGGAAC CTCCTTCCGC
GTGAAGTCGG ACGAGTTTTT CGTGAACCTG GCCGATGAGC TGGATGTGGA AGCGGAACGC
GAAAACCTCC TCCGCGAATT GGAATACACG AAAGGCTTCC TGGATTCGGT GATGAAAAAA
CTCTCGAATG AGCGTTTTGT AGCCAATGCA AAAGGCGATA TCGTCGAAAA GGAAAGGGCC
AAGCAGGCCG ACGCCGAAGC GAAGATCGCG ACGTTGACCG AGGCATTAGC AAGATTAAAA
TAA
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| Protein sequence | MISKTYAPQE IEDKWYSYWI ENKFFQSKPN PDKEPYTIVI PPPNVTGVLH MGHMLNNTIQ
DILIRKARME GKEACWVPGT DHASIATEAK VVAMLKERGI NKRDLTRDEF LEYCWEWTHK
YGGIILKQLR KLGASCDWDR TRFTMEPDLY DSVIDVFIDL YNKGEIYRGH RMVNWDPQAR
TTVSDEEVIM KEVNQKLVYL RYPLVGEDGE GRMEEGVTIA TTRPETIMAD VAICVNPADE
RYQHLIGKKV LIPLINRAIP IIADDYVEME FGTGCLKVTP AHDTNDYELG KRHNLPIIDL
LNEDGTLNDK AQILVGEERF VARKKIIKLL EESGNLVKVE EYRSNVGHSE RTDSVIEPRL
SEQWFLRMEK ISKPAFDNVM NDTVQLIPAK FKNTYRHWME NVRDWNISRQ LWWGHRIPAY
YLNDGTMIVA KSKREALRKA QHEYQLFALT EEDITQDPDV LDTWFSSWLW PISVFNGIKE
PDNEEVNYYY PTNDLVTAPE ILFFWVARMI IAGYEYRGQY PFKNVYLTGI VRDKQGRKMS
KSLGNSPDPI DLIEKYGADS IRTGMLFSSQ AGNDLPYDEK LIEQGRNFGN KIWNAFRLVK
GWTVDSELPV PEGSKLAVQW FESKLNQTLA EVQDHFSKFR ISDALNSVYK LIWDDFCAQY
LEMIKPGFEQ PIDLSTYDST LDFFDRQMRL LHPFMPFISE EIWQNIIERG EKESICIAHF
PQAAEFDQSL LNDFDILFEL VSSIRNLRNS KGISPKTALP LAIRTDSNER YNALTPLIEK
LANVEGISYV SGEAEGTSFR VKSDEFFVNL ADELDVEAER ENLLRELEYT KGFLDSVMKK
LSNERFVANA KGDIVEKERA KQADAEAKIA TLTEALARLK
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