Gene Dfer_4090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4090 
Symbol 
ID8227688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4937252 
End bp4940458 
Gene Length3207 bp 
Protein Length1068 aa 
Translation table11 
GC content53% 
IMG OID644931933 
Productprotein of unknown function DUF303 acetylesterase putative 
Protein accessionYP_003088458 
Protein GI255037837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACACT ATCTACCATT TTTGTTTTGG GTAGTATTAA GTATTTTTTC CTTCTCCGCA 
CACGGTCAAA TCAACATCGA TTTCCCATCG GATCGCGCCG TTTTTCAGCG TGATAAAGGC
AATAAGGCGA ACATTTTCGT TGCCGGAAGC TATACCAGAA TAGCCGACAA GATTGAGGTC
AAACTCTCCG CCCGCGATGG TGGCTCCGAC AAGGATTGGA CAACGGTTAA AGACAAACCG
CAGGGTGGTT TCTTCTCGGG CACAATTTCC GACGTACAGG GTGGCTGGTA TAAAATGGAG
ATCCGGGCTT CCAAAGGCGG ACAGGTGATT GCCACGAACT CCGTCGAGCA CGTGGGTGTG
GGCGAGGTGT TTATGATCGC CGGCCAATCC AATGGCGAAG GTTACAGGGA TGGCCAGCCC
AATCCCGGGG ACATATGGGA TGCTCAGGGC GCAGGTGACG ACCGGGTAAG TGTTGTAGCG
CATTCTACTG TGCCCGATCA AGCTAACCTT CCGAGTGGCG ACTCCAATTT CCCTTATCCG
AATTTCGGAC ACCTTGATAA AGACAGTAAC ATCTCTCCGC GCGGCAAAAC GGCCTGGTGC
TGGGGAAGAT TGGGAGACAG ACTTGTTTCC AAACTCGGCG TGCCGGTACT GTTTTTCAAT
GTAGCATGGT ACGGAAGCCA CGTAGGAGCA TGGAGAGAAA GCATCAACGG AGGCAGGCCG
AAGTCCGTGT ATGCCGACGC CTATTTCGAT CCAGCAGGAA TGCCATTCGG TAATATGCGT
GACGTGATCC GCCGCTATAC TTCGCTTACC GGCATGCGCG GCGTGCTCTG GATCCAGGGC
GAAGCCGACA CCGACAACCG CACGGGCACC GACTCGTATT TCAACGACCT TAAAGCCGTC
ATAGAAGCAT CCCGCAATGA ATCCGGCCAG GATATTTCCT GGATGGTCTC TCAAACTTCC
TATATCCGGG GCAATACCAG CAACCAGGTG ATCGCCGGCC AGGGAAGAGT TATCAGTGAG
GTGCCAAACG TTTTCCAGGG ACCGCTTACC GACCTAATCC AAACTCCCCG CATTGACGGC
GACAATGTCC ATTTCATGAA AGATGGGCTC ATTCAGCTCG CCGATGCATG GTATGATCGC
CTTAACGATG ATTTTTTCGC CCGGTCCAAC CCCTATTCGG GCATGTCGCC GCTGCGCATC
TCTGCCTCCT GTGCAGGTAA TGGCAATGTG AACTTGACGG TCGAAAATGG CGGCGTGCGC
GATATCAGTT GGAGCAGCGG CGGAAATTCC AACAGCGTAC AAGTCGGCAA CGGAACTTAC
CGTGTTACAG CGAGGGACGA TCGTAACAAC CTGATCTGGT CGCCCGAAAT CCGCATTTCG
GAACAAATTC AGCCTAATCA GCCCACCATT TCCATCGACG GCAGCAACCC GGTTTGTTTG
GGCAATACAG CCACGCTCGT TTCAAGTTCG GGAGAAAATG CGACCTGGAA TACCGGCGCC
ACGGGCGACC GGCTGCCTGT AACCGCGGGC GGTGAATATT TCGTCAAAAT CACCAACATT
TACGGCTGCG AGGCGCAATC CGAGAAGATC GCGATGAGAG TAGTAACCTC GCCATTGCCT
GCCAAACCAA AGATTACAGC TTCTGGCGGC CTGATATTCT GCCAGGGCGG CGAAGTGACG
CTCACTTCGG ATTCGAAAGA GAAAAGCGTA TGGTCCAACG GTGTGACCAA TGCAAGCATT
ACCGCTGTTT CCTCCGGCGA TTTCCGCGTA CGTGCACTCG ATGAAGAAGG CTGCTACTCT
CCCGAATCGG ATGTGGTAAG CGTAAAAGTG AATCCACTAC CGGATAAACC ACAGATTTCA
TTGGGTGGTG AAACCACATT CTGCGACGGC GGCAACGTGA CGATGACATC CAGCTACGAC
TCAGGCAACA TCTGGAGCAC GACTGCCACC ACCAAAACGA TTTCAGTAAC CGCCACAGGC
ACCTTCTCGC TCACGCAGCG CGATGCCAAC GGATGTGAAT CCAAATCCGA CGAAGTGGCT
GTGAAAGTAA ACCCGTTGCC CGCAACACCT ACGGTCACAT CGCTGCGCCC GACGACATTC
TGCGACCGCG ATTACACGAC GCTCCGCAGC AGCGAGGCCT ATTCCTACCA ATGGAGCAAT
GGTTCAACCG AGCGGGAAAT CGAAATTCGT ACTTCCGGCA ATTTTACTAT TTCGGCCAAA
GATGCCAATG GCTGTGTTTC GCCTGTATCG CCCGTGGTGC AGGTAGTAGC AAACCCGCTT
CCGCCAACAC CCGCAATTAC CGCCGACGGG CCAACGACAT TCTGCGCCGA CCTGAGTGTG
AACCTGACTT CGACCACAGC CGCCGGCTTC CTGTGGAGCA ACGGAGCTTC CACCCAAACA
TTGAAAGTAA CTGCCGCCGG TAACTACTCG GTACAGACGA TCAACGAGTT CCAATGCTAC
TCCGACCGCA GCAATGAGAT TTCCACCCAA ACCCTCGCAT TGCCGCCGTC GCCCAGCGTA
ACGGCGCGTG AGGCAACTAC TTTCTGCGAT GGCGACACCA TTTATCTGAA AGCGTCCAAT
GGCAATTCAT TCTTTTGGAG CAACGGCCTC GAAGGCGATA GCATTGAAGT ATTCCAAACC
GGCGACTATG CCGCGCGGAT CGTCGATGAC CAAGGTTGCT ATTCTCCATA TTCGGCCCGG
ATCGCCATTG AGGTAAAACC TTCACCGACA GCTCCGAATA TTAAGAAAAC CGGGGTTTAC
ACACTTTTCG CAGAGAATAA CCTCAATACA GGAGACCATG TGTGGAAGTA TAATGATGTG
GAATTGACTG AAAACAGTGC AACGTTGAAG GCCGTCCGTG CGGGTAAATA TGTGGTGAAC
AACACCATCG TTTATAGTCC TACGCTCACT TGCGCGTCCG AATTCTCCGA GCCGTTCCAG
TTCTATCTCG ACACTGAGAA TCCGGGCTTT GTAGCATACC CCAATCCCGC CTCTGCCGAG
AGGGTAACGG TTGAAACGCT GGCTGATGTG TTCAATGCGG AAGTTCAGAT CATCGATAGT
CGCGGTATCA TTCACCGGAC CTATCGGGTG GCGAAATTCG ACCGTCAGCA TTTCTTTAAC
ATCATGGGAC TTTCGAGCGG GATCTATTTC ATCCGCATCA ATTCAACCAC GCTGAATGCG
ACGCAGAAAC TGGTGATCGT ACGGTAA
 
Protein sequence
MRHYLPFLFW VVLSIFSFSA HGQINIDFPS DRAVFQRDKG NKANIFVAGS YTRIADKIEV 
KLSARDGGSD KDWTTVKDKP QGGFFSGTIS DVQGGWYKME IRASKGGQVI ATNSVEHVGV
GEVFMIAGQS NGEGYRDGQP NPGDIWDAQG AGDDRVSVVA HSTVPDQANL PSGDSNFPYP
NFGHLDKDSN ISPRGKTAWC WGRLGDRLVS KLGVPVLFFN VAWYGSHVGA WRESINGGRP
KSVYADAYFD PAGMPFGNMR DVIRRYTSLT GMRGVLWIQG EADTDNRTGT DSYFNDLKAV
IEASRNESGQ DISWMVSQTS YIRGNTSNQV IAGQGRVISE VPNVFQGPLT DLIQTPRIDG
DNVHFMKDGL IQLADAWYDR LNDDFFARSN PYSGMSPLRI SASCAGNGNV NLTVENGGVR
DISWSSGGNS NSVQVGNGTY RVTARDDRNN LIWSPEIRIS EQIQPNQPTI SIDGSNPVCL
GNTATLVSSS GENATWNTGA TGDRLPVTAG GEYFVKITNI YGCEAQSEKI AMRVVTSPLP
AKPKITASGG LIFCQGGEVT LTSDSKEKSV WSNGVTNASI TAVSSGDFRV RALDEEGCYS
PESDVVSVKV NPLPDKPQIS LGGETTFCDG GNVTMTSSYD SGNIWSTTAT TKTISVTATG
TFSLTQRDAN GCESKSDEVA VKVNPLPATP TVTSLRPTTF CDRDYTTLRS SEAYSYQWSN
GSTEREIEIR TSGNFTISAK DANGCVSPVS PVVQVVANPL PPTPAITADG PTTFCADLSV
NLTSTTAAGF LWSNGASTQT LKVTAAGNYS VQTINEFQCY SDRSNEISTQ TLALPPSPSV
TAREATTFCD GDTIYLKASN GNSFFWSNGL EGDSIEVFQT GDYAARIVDD QGCYSPYSAR
IAIEVKPSPT APNIKKTGVY TLFAENNLNT GDHVWKYNDV ELTENSATLK AVRAGKYVVN
NTIVYSPTLT CASEFSEPFQ FYLDTENPGF VAYPNPASAE RVTVETLADV FNAEVQIIDS
RGIIHRTYRV AKFDRQHFFN IMGLSSGIYF IRINSTTLNA TQKLVIVR