Gene Dfer_4089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4089 
Symbol 
ID8227687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4934880 
End bp4937042 
Gene Length2163 bp 
Protein Length720 aa 
Translation table11 
GC content54% 
IMG OID644931932 
Productprotein of unknown function DUF303 acetylesterase putative 
Protein accessionYP_003088457 
Protein GI255037836 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.498931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTATA GAATTATTCT TCCGGTAGTG GCAAAGGCAT TGCTGTTGGT ATGTCTCGTT 
TCGTCGACAG TATTTTCCCA GATTAAAATT ACCTCCCCAA CTTTCCAGGC CGTATATCAG
CGTGATATTT CGGGACAGCG AGAGCTTACC GTTTCCGGTA CATTCACGGC TCTGATGGAT
AAGATCGAGA TCAGGGCGGT TCCTGTTGTG CAGGGGCAGG GCGTGGAAAC GCCGTGGCAA
GATTTGCAGG TTGCGCCGAA AGGTGGCGTG TTCATGGGAA CGATCACATT ATACGGTGGA
TGGTACACGC TGGAAGTACG CGGCATTGCC GACGGAAAGG TGGTCGGCCG CGACGTGCTG
GCCCGCGTGG GTATCGGTGA AGTTTTCCTT ATCGCAGGTC AGTCGAATGC GCAGGGCCTT
AAAGGCAAGC CAACCCCTCC GGGAGCCAAC GACGACCGTG TGCTGTATAT CGACAACTAC
GAAAATGACC CCGACGGCCG TTACAATGAC TTGCTTACAG ACCCCGTTCC CCCGACATTC
TCCAAAATCA CTAGTGATAT TAAAACCATG TCCCCCCGCG GCCAGACAGC CTGGTGCTGG
GGAGCGTTGG GCGACTTGCT GGTTTCGAAA CTGAATGTGC CCGTGCTGTT TATCAATGCT
GCATGGGAAG GCACTTCGGT TACCAACTGG GCTGAGAGCG CTTCAGGACA AAGGACCGTC
AGCTATTACG GATATAAATA CAACACCGGC ATGCCGTATG CCAACCTTCG CATCTCGGCC
CGTAACTATG GCAACCAGTA TGGCTTACGT GCGGTACTTT GGATGCAGGG CGAAACGGAC
GGCTTCTTCG GTACTCCTTC CGCGCTTTAC CGCACGAGTT TGCAAAAAAT CATCGACCAG
CTGAGCATCG ATACCCAAAA AAGGATCTAT TGGGTAATCG CCCGCACCAG CCTTTCTTCT
GGAGACGACA AGGTTGATCC GAAGCCATAT CCCGGAATTA TCGCCGCGCA GAATGCGGTC
CTTAGTACGC CATTTAACCC GACATACGCA GGTCCGGAAA CCGATCCGCT CGTGCCGGAT
CGCAAAGACG GCCTGCACTT CGAAGGCGAA GACCAGCTGC GCATTCTCGC CAATGCCTGG
AACCAGAGTC TCGACGCCGA CTTCTTCTCG CGCGTTACGC CTGTCGCTCC GGCTGCCGTA
CCGGCTATCA CTGCCTCCTG CGTGACTGAA AACAATGCCG TGCGACTTTC GTTGCCGGCC
GGATATGCCT CCTACGAGTG GAAAAGCACC AGAGAAGATA ATCCGATCAG CACGCCCAAA
AGCAGTACCA TTACAGTGAG CAAAGCCGAT ACATACCGCG CCACCGTGCG TGATGCGGCT
GGCAACTCCA TCCTTACTTC GGTGGTAGTC CTCGATCACG ACGCGAAACC GACGCAACCA
AGCATTATCC AGCAAGGCGA GCAGCAGGCG TGCGCCGATT CGTCGTTCCA ATTCTCGGTG
AACGATGGCG GTAACATTTA TGACTGGTAC AAACAAGGCA GCACAACACC GATAGCTAGC
GGCGTAACAG CTCAAATCGC TGAAAGCGGA AACTATTACG TGAGAGCACA GAACATTTTC
GGTTGTATTT CCGAAAACTC TACCGCGTCC ACACTCACCG TCCGTGCAGC CATTACCAAG
CCGACGATCG AGCCGTCAGG ACCTTTCAGC GTGTCGGCCA GCATTCCCGA AGGCACTCAG
GTGAATGAAA GTTTTGTGTG GAGACGGCCG GGCACGGAAA GCGATACCAC TGCAACGCTC
ATCAAAATCC TGAAATCGGG AGAGTATTCG GTTAAGGCAA AAGTCACTTA CACGATCGGC
AACAATAGCC TGGTTTGCTA CTCCGACACC GCGTCACGCG AATTCAAAAC CAACGAACAA
AATGAGGTGG TGATTTACCC CAACCCAAGC CAGGGCACCT ACATTTACAT CGAATCGCGG
GATAATATCA GGGACGCGGC AGTGGAGCTT TTCGACATCC GCGGCAACCT CATCAAAACC
ACACCTCCTG CCCTGCTCAA CAGCCGGATG CAGATCGATG TGGGCCTTTT GCCGACTGGC
AAGTACATTC TTCGCGTAAC CGGTCAGGGA CAGAGCCTTA CCAAGCAAAT TGTGATCAAG
TAA
 
Protein sequence
MRYRIILPVV AKALLLVCLV SSTVFSQIKI TSPTFQAVYQ RDISGQRELT VSGTFTALMD 
KIEIRAVPVV QGQGVETPWQ DLQVAPKGGV FMGTITLYGG WYTLEVRGIA DGKVVGRDVL
ARVGIGEVFL IAGQSNAQGL KGKPTPPGAN DDRVLYIDNY ENDPDGRYND LLTDPVPPTF
SKITSDIKTM SPRGQTAWCW GALGDLLVSK LNVPVLFINA AWEGTSVTNW AESASGQRTV
SYYGYKYNTG MPYANLRISA RNYGNQYGLR AVLWMQGETD GFFGTPSALY RTSLQKIIDQ
LSIDTQKRIY WVIARTSLSS GDDKVDPKPY PGIIAAQNAV LSTPFNPTYA GPETDPLVPD
RKDGLHFEGE DQLRILANAW NQSLDADFFS RVTPVAPAAV PAITASCVTE NNAVRLSLPA
GYASYEWKST REDNPISTPK SSTITVSKAD TYRATVRDAA GNSILTSVVV LDHDAKPTQP
SIIQQGEQQA CADSSFQFSV NDGGNIYDWY KQGSTTPIAS GVTAQIAESG NYYVRAQNIF
GCISENSTAS TLTVRAAITK PTIEPSGPFS VSASIPEGTQ VNESFVWRRP GTESDTTATL
IKILKSGEYS VKAKVTYTIG NNSLVCYSDT ASREFKTNEQ NEVVIYPNPS QGTYIYIESR
DNIRDAAVEL FDIRGNLIKT TPPALLNSRM QIDVGLLPTG KYILRVTGQG QSLTKQIVIK