Gene Dfer_4079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4079 
Symbol 
ID8227677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4926672 
End bp4927190 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content48% 
IMG OID644931922 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 6 
Protein accessionYP_003088447 
Protein GI255037826 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.965894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0565222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCAG CAGTTTCATT TTTTTACTTT CTATCCTTCC TCACCATCCT CAGCGCAGTG 
ATGGTGGTGG TATCGCGTAA CCCCATTCAC AGCGTGCTGT ACCTGATCCT GACGTTCTTT
ACGCTCTCAG GGCACTACAT CCTGCTGAAT GCGCAGTTTC TGGCGGCGGT AAATATCATC
GTGTACGCAG GAGCGATTAT GGTACTTTTC CTCTTCGTGA TCATGTTTTT GAATATGAAG
CAGGACCAGG AGGAGTCTAA AACGAATCTC ACCAAAATAG CCGCCACAAT CGTCGGCGGG
ACGGTGTTCG TGATCCTTTT CGGCGCTTAC CGCAAAACGG CTATCGAGCC ATTCAATCCG
CAGACTTACG ATTCACAGAT CGGTATGATC GAGAGCCTGG GCCATATGCT TTTCCGGGAT
TATCTGTTGC CATTTGAATT GGCATCTATC CTGTTGCTTG TGGCGATGGT GGGGGCAGTA
TTATTAGGTA AAAGAGAGAT CGGCGAGCGG CATTTTTAA
 
Protein sequence
MNSAVSFFYF LSFLTILSAV MVVVSRNPIH SVLYLILTFF TLSGHYILLN AQFLAAVNII 
VYAGAIMVLF LFVIMFLNMK QDQEESKTNL TKIAATIVGG TVFVILFGAY RKTAIEPFNP
QTYDSQIGMI ESLGHMLFRD YLLPFELASI LLLVAMVGAV LLGKREIGER HF