Gene Dfer_4030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4030 
Symbol 
ID8227628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4879728 
End bp4880393 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content52% 
IMG OID644931873 
ProductAnkyrin 
Protein accessionYP_003088398 
Protein GI255037777 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.147969 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGA TATTGCTGCT TCTGCTGGCG GGTATGTTTG CATCTTGTAA TGCGAATGAT 
CAGCCGGTCA CAAACGAGAT GAATATGCGA CAGGACAACT TAATCGAGCT GGTAACAAAA
AACGACCTCG AAGGCATGAA GAAGGCGCTC GCTGCCGGAG CTAATGTAAA TACAAGGGAC
AATCGTGGAC GTACGCTCCT GTTGTTGGCG ACTATCGACA AACAAACGGC GATGGCCACG
CTGCTCGCCG AGAATGGCGC TGATGCCAAT TTGCAGGATG ATATTCACGA CAGCCCGTTC
CTTTACGCAG GGGCTACCGG GCAAACGGAG CTGGTGAAAA TTTTCCTGGC TCGTGGCGCG
CGGTTTGACA TTTTCAACCG GTACAATGGA ACCGCATTGA TCCCCGCATG CGAACGCGGA
CACGTGGAAA CCGTGAAAGT GCTGGTCGGC ACGAAAGGCT TCCCGGTTAA TCATGTGAAT
CGGCTCGGCT GGACCGCATT AATGGAAGCG ATAGTGTTGG GAAACGGAAG TAAAAAGTAT
CAGGAAATCG TGCAGATCCT CAAAGATGGG GGTGCCGATG TTGGAATTCC CGACCACGAC
GGTGTCACAC CGTTGCAGCA CGCCAGAAAT CGCGGTTTTG CTGAGATTGT GAAGATTTTG
GAATGA
 
Protein sequence
MKTILLLLLA GMFASCNAND QPVTNEMNMR QDNLIELVTK NDLEGMKKAL AAGANVNTRD 
NRGRTLLLLA TIDKQTAMAT LLAENGADAN LQDDIHDSPF LYAGATGQTE LVKIFLARGA
RFDIFNRYNG TALIPACERG HVETVKVLVG TKGFPVNHVN RLGWTALMEA IVLGNGSKKY
QEIVQILKDG GADVGIPDHD GVTPLQHARN RGFAEIVKIL E