| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4009 |
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| Symbol | lysS |
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| ID | 8227605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4858147 |
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| End bp | 4859862 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644931851 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_003088378 |
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| Protein GI | 255037757 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACTGA GCGAACAGGA AATACTGCGC CGTCAAAAGC GCGAAGAACT CATGCGGATG
GGCATTGAGC CTTACCCTGC CGAGGAATTT ATCGTGAACG CCTACGCGGC CGACATCCTT
AAAAACTACG AAAACAACAA GATCGACTAT AAACACGTGA CCATGGCCGG CCGGCTGATG
GGCTTCCGCA TTATGGGAAG CGCCGCTTTC GCCGAGTTCC AGGACAGCAC GGGACGCGTT
CAACTTTACT TCCGCCGCGA CGACCTCTGC CCCGGCGAAG ACAAGACATT ATATAATACT
GTTTTCAAAA AGCTGCTCGA TATCGGTGAC ATGATCGCCG TTACGGGCTT TGTATTTACT
ACCCAAACCG GCGAAATCTC GGTTCACGTG CAGGAATTCA AGATCCTGAA CAAATCGCTC
CGCCCGCTGC CGGTGGTGAA GCGTGACGAG GACGGCAATG TACACGACGG ATTCACCGAC
CCCGAACTGC GTTACCGCCA ACGTTACGTG GACCTAATCG TTAACCCCGA GGTGCGCGAG
ATATTTATCA AACGGGCCCG GATCATCACC ACCATGCGTT CGCATTTTGA TTCGAACGGC
TGGCTGGAAG TGGAAACGCC GGTGCTGCAA TCGATCCACG GCGGTGCGGC TGCAAGGCCT
TTCACCACGC ACCACAATGC GCTCGACCTG GGCTTGTACC TGCGTATCGC GACGGAGCTG
CATTTGAAAC GGCTCATTGT AGGCGGTTTT GAAGGCGTGT ATGAGTTTGG CAAACTGTTC
CGTAATGAAG GAATGGACCG CACGCACAAC CCCGAGTTTA CGACCGTGGA GCTCTATGTG
GCTTACAAGG ATTACCTCTG GATGATGAAA ATGACCGAGG AGGTGCTCGA AAAGGTGGCC
CTGGCCGTGA ATGGCACCAC CAAAGCCACT TTCAATGGCG TGGAGCTCGA TTTTGCAGGC
CCTTACCCAA GGCTCAGCAT TACAGATGCG ATCAAGCAAT TTACTGGCCT GGATGTGGAG
GCGCTCGACG AAGTGGCGAT CCGCGAACAA TGCCGTGCAT GGGGCATGGA GGTGAACGAA
AGCATGGGCA AAGGCAAGCT GATCGACGAA ATTTTCGGTG AGAAAGTGGA ATCGAACATT
ATCCAGCCTA CGTTCATCAT CGACCACCCG GTTGAAATGT CGCCGCTGAC GAAGAAACAC
CGCACCAAAA AAGGCATGGT AGAGCGTTTC GAGCTGTTTG TGAATGGCCG CGAGATCGCC
AATGCCTATT CTGAGCTCAA TGACCCTATC GAGCAGAAAG AGCGTTTCGA AGACCAGCTC
CGACTGAAAG AGAAGGGCGA CGACGAGGCC ATGGAAATGG ACGACGACTT CATCCGCTCA
CTGGAATACG GCATGCCTCC GACTGCCGGA ATCGGGATCG GCATTGACCG CCTCACGATG
TTGCTGACGG ACAATGTGAG CATTCAGGAA GTGATCTTCT TCCCGCAAAT GCGTCCGGAG
AAGAAAGCGG AAATCGCGAA AGAATCGGAC TACGTAGAAG CCGGCGTGCC GGCGGTATGG
GTGCCCGCAT TGCAGAAAAT GAATATACTG ACGATCGAGC AACTGAAAGG CGCCAATGCA
AACAAGATCT TTAATGACCT GGGCGGGATG CGCAAGAAGC TCAAAATAGA AGAGAAAATG
CCGCAGCTGG ACGATATAAA GTCCTGGGTG GAATAA
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| Protein sequence | MLLSEQEILR RQKREELMRM GIEPYPAEEF IVNAYAADIL KNYENNKIDY KHVTMAGRLM
GFRIMGSAAF AEFQDSTGRV QLYFRRDDLC PGEDKTLYNT VFKKLLDIGD MIAVTGFVFT
TQTGEISVHV QEFKILNKSL RPLPVVKRDE DGNVHDGFTD PELRYRQRYV DLIVNPEVRE
IFIKRARIIT TMRSHFDSNG WLEVETPVLQ SIHGGAAARP FTTHHNALDL GLYLRIATEL
HLKRLIVGGF EGVYEFGKLF RNEGMDRTHN PEFTTVELYV AYKDYLWMMK MTEEVLEKVA
LAVNGTTKAT FNGVELDFAG PYPRLSITDA IKQFTGLDVE ALDEVAIREQ CRAWGMEVNE
SMGKGKLIDE IFGEKVESNI IQPTFIIDHP VEMSPLTKKH RTKKGMVERF ELFVNGREIA
NAYSELNDPI EQKERFEDQL RLKEKGDDEA MEMDDDFIRS LEYGMPPTAG IGIGIDRLTM
LLTDNVSIQE VIFFPQMRPE KKAEIAKESD YVEAGVPAVW VPALQKMNIL TIEQLKGANA
NKIFNDLGGM RKKLKIEEKM PQLDDIKSWV E
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