Gene Dfer_3987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3987 
Symbol 
ID8227583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4836966 
End bp4837289 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content50% 
IMG OID644931829 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003088356 
Protein GI255037735 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000172113 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.563656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTCC CTAATCAACA AATTTTGGAT CGGGTAACCC AGGGTGACGA GGCGGCATTT 
ACGCAACTAC GTTCGTATTT CCACGTCCCG GCATTCAAAT TTTGCTCCGT TCTGTTGAAG
GACGAGACGG AGGCGGAGCA TGTCATCGAT TCCGTTTTTA ACAAGATCTG GAATGACCGT
CTTGACCTGC GGGCGGAGGG AAACTTTCAA TCGTACCTGT TCAGCAGCCT CAAAGACCAG
ATTTTCGGCG AAATGAAAAG GTATGCCGAC CCCGTGGCCC GAAAGCAGTA TTTCGATCGG
ATCCAGTCGC TTGGCGTCAG TTAA
 
Protein sequence
MTFPNQQILD RVTQGDEAAF TQLRSYFHVP AFKFCSVLLK DETEAEHVID SVFNKIWNDR 
LDLRAEGNFQ SYLFSSLKDQ IFGEMKRYAD PVARKQYFDR IQSLGVS