| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3985 |
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| Symbol | |
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| ID | 8227581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4834305 |
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| End bp | 4835888 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644931827 |
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| Product | SSS sodium solute transporter superfamily |
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| Protein accession | YP_003088354 |
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| Protein GI | 255037733 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000000567258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.756619 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCT TACCTTTCAT TGACCTCCTC ATTGTAATTG CCTACCTCGC AGGGATGGTG
GCTGTCGGGA TTTATTTTTC GCGAAAAAAT ACCGATGCCG ACCAATTTAC CAAAGCCTCG
GGCCGCATTC CCGGCTGGGC GATCGGTATT TCGATATATG CTACTTTTTT GAGCAGTAAT
ACCTTTCTGG GTGTGCCGGG CAAGGCGTTC GGCAGCAACT GGAGTTCTTT CGTGTTCAGC
TTATCGATGC CGTTTGCAGC CTGGGTGGCT ACCCGGTTTT TCATACCATT CTACCGCAGT
ACCGGCGAAG TTTCGGCTTA CACCCATCTT GAACACCGTT TTGGGCCGTG GGCGCGCACT
TACGCGGTGG TTTGCTTCCT GCTCACCCAG CTCGCACGCA TGGGTTCGAT CTTTTTCGGC
ATCGCATTGA GCTTGCAGGC GCTTACAGGT TACCCCATGT CGACGATCAT GGTCGTGGTG
GGCATTTGCA TTGTGCTGTA CACCGTAATG GGCGGTATGG AAGCGGTGAT ATGGACGGAG
GTGGTACAGG GCGTGATCAA GACCGTGGGC GCATTAGTGA TTCTTTATCT GGTAGTTACG
GGCGTTTCAG GCGGGATGCC GAGCATTGTC GAGATCGGTA AGGCCAATGA CAAATTCAGC
CTGGGTACGC TGGCGCCGGA TTTTACGACG GCATCCTTCT GGGTGATTTT GCTTTACGGG
TTTTTCATGA ACCTGAATAA CTTTGGAATG GACCAAAACT ACGTACAGCG CTACCACACC
ACGGCTTCGG CGAAGGAGGC GGCGAGTTCG GTCTGGCTTT GTGTGTATTT GTATGTGCCT
GTTTCGCTGA TATTCTTTTT ACTCGGAACC TGCCTTTTTG CTTATTACCA GGGCAATCCC
GAGTTGCTCC AAACCATTAA AATGCAGGTA GCGGCTGAAA AACTGCCCGG CGGAACGTCG
GATGCGATCA CCAGCCTGGC TGCCACGCTC ACGCCTGCCG ACTATGGCGA TAAGGTAATG
CCGCATTTCA TGGTGACGAA AGTGCCCGTG GGGCTTCTGG GCCTGATTAT CGCCGCGATC
ATGTCGGCTG CCATGAGCAC GATCAGCTCG GGAATGAATG CCTCTGCAAC GGTTTTTTCA
GTGGATATTT ATCAAAAATA TATCAATCCG GACCTTACAC CGAAGCAATC GCTTCGCCTG
CTCTATGTTG CTACCACCGT ATTCGGCTTG CTGGGAATGG TGACGGGCAT TGCGATGATC
GGCGTCAAAA GCGTGCTGGA TGTGTGGTGG ATGCTTTCAG GGATTTTCGC GGGCGGGATG
CTTGGATTGT TCCTGCTGGG CATGATTTCC AAAAGTACAA AGAATACCGA GGCGCTCACC
GCCACAATTA TCGGGATTAT CGTGATCGTG TGGATGACAT TTTCGACGCA ACTGCCTGAC
AGTTATTCGG TTTTGCGCAA CCCGCTCCAT CAGAACATGA TCATGGTGGT AGGAACCCTG
ACAATCTTTT TGGCCGGCGT GCTGCTCACC AGGCTGAGAC GCAAGCAGCC CTCAGAAAAA
GAAGTGCTTT TACCAAGCAA ATAA
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| Protein sequence | MKSLPFIDLL IVIAYLAGMV AVGIYFSRKN TDADQFTKAS GRIPGWAIGI SIYATFLSSN
TFLGVPGKAF GSNWSSFVFS LSMPFAAWVA TRFFIPFYRS TGEVSAYTHL EHRFGPWART
YAVVCFLLTQ LARMGSIFFG IALSLQALTG YPMSTIMVVV GICIVLYTVM GGMEAVIWTE
VVQGVIKTVG ALVILYLVVT GVSGGMPSIV EIGKANDKFS LGTLAPDFTT ASFWVILLYG
FFMNLNNFGM DQNYVQRYHT TASAKEAASS VWLCVYLYVP VSLIFFLLGT CLFAYYQGNP
ELLQTIKMQV AAEKLPGGTS DAITSLAATL TPADYGDKVM PHFMVTKVPV GLLGLIIAAI
MSAAMSTISS GMNASATVFS VDIYQKYINP DLTPKQSLRL LYVATTVFGL LGMVTGIAMI
GVKSVLDVWW MLSGIFAGGM LGLFLLGMIS KSTKNTEALT ATIIGIIVIV WMTFSTQLPD
SYSVLRNPLH QNMIMVVGTL TIFLAGVLLT RLRRKQPSEK EVLLPSK
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