Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3968 |
Symbol | |
ID | 8227564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4817473 |
End bp | 4820379 |
Gene Length | 2907 bp |
Protein Length | 968 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644931810 |
Product | hypothetical protein |
Protein accession | YP_003088337 |
Protein GI | 255037716 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.21265 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGAC CTCTATCTGC CCGCATCCTG CTTGTAATTC TCATGCTGAC GCTTGCGTTC AGCCAGGCAT TTGCGACCCA CTTCCGGGCC GGCGAAATCA CTGCGCGCAG GATGTCGCTC ACATCGCACA TCTACGAGAT CAAAGTCACC GGCTATTTTG ACATGGTCAG TGGAAAAGAC GCTGCGGACC GGCAGACATC GGTCTTCTTC AAAATAGGGA ATGTGCAGTC TACGGGCACG CCGGTAACCA TCGAGGCGCC GAGAATAATG CCGATTGTGG ACATCGGGAA TAACACCACC ATGAATACCT ACATCGCCAC CTACACCTTC CCGACCACCG GCGCCTACCG TATTTCCATG GAAGTGGATG CAAGAAACGA TGGCGTACTG AATATTGGCC CAGAGCCTAC CAACCGGCTT AACTTCTATG TCAGCACGGT GCTCGAGATC AATGCCACAT TTGGTTTGAA CCGCACTCCC GTTCTCCGAA ACGCTCCGAT CGACCTCGCC GCGGTGGGCC AGCGCTATAT TCATAACCCT GGCGCATTCG ACGCCGATGG CGACAGCATT GCTTACCGCA TGTTCACTCC CCAGCAAGCC GGCGCCAACG GAGTAGGCGT GAACCTGGAA TACCAGGACC CCAACACCGT GACACCTCCC GGCCAAACCG AAACGGGCGG CTCGCCGGCC ACTTTTGCCA TTAACCGGGT TACGGGCGAC ATCATCTGGA ATGCACCGGT AACAAAAGGA TATTATAACG TCGCGTTTGT CGTGGAAGAA TGGCGCGACG GGGCACTGAT CGGGCAGATC GTCCGAGATA TGCAGATCAT CGTCGACGAT GTGCGAAACG ACCGGCCCGC GGTTCCGCCC TTACCGGACA TTTGCGTGGA AGCCGGCACG CTTATCAACC AAAGAGTGAC CGCCACCGAC AGAAACGGCG ACAGGCTCAA CCTGACTTCG GCGAGCGGTG TTTATGATCC GACACTGATC AAACCGGCCG TGGCCAGTTT CACCGTATCC GGGCAGGGTT CGCAGAGCTC GGTTACCGGC ACGTTCGTTT GGCAAACTTC CTGCGAGCAT ATCAGACTGG AACCATACAA TGTGCTCTTC AAAGTCGAGG ACGCGGCGCC TCCGGGCTAT CCGAACCCTT CGCTGTTCAG GAAACTGGCC GACATGACGA CCTGGAATAT CCGTGTGTAC GGTCCCAAAC CTACCGGCCT GAAAGGCGTT GCCGCCACCG ACCCGGCCGG CACCGCTTAC CGGCTCACAT GGGATGCCTA CAAATGCCAG ATTGCCGGCG CGAAAATCGC CATTTATCGT GCCGAGCAAT GCACCGATAT TCCGGACGAT GTGTGCAGCC CTGGCATTCC GGCGGGCTCC GGCTACCAGG AAATTGGCAG GGTGGACGTG GATGAGACTA CATTCCTCGA CAATAACAAT GGCGACGGCC TGCGCCCGGG CGTTTCCTAT TCTTACCGCA TTGTGGTGCT GTTTCCGAGA CCCGGCGCCT CTCCCGGCGA ACCGGGGTAT CTGATTGGCG GCGGCGAAAG CATCGCCTCA CCGGAGTTTT GCCTCAATTT ACCCGTTGTG ATGCCCGTCA TTACCAATGT GACGGTCGAT TCCACCAGCA CTACCAAAGG TGTGATCACG GTTAAATGGA TGAGGCCGGC CGCTGCCGCG GGACTTCCGG CGCAATACCG GCTTTTCAGG GCTACGGGAC AGAATGGCAC GGCGTTTACA CAAATTGCAA CCATTAATAC AAACCTCGCG GCAGGCGCGC GCGACACACT GTTCGTGGAC CGAAACCTCG ACACCGAAGC CAACGCCTAC AATTACAAAC TCGAATATTA CACCACCGTA AACGGGCAGC TAACGAAGTT TGACGAAACG AAAACGGCCA GCTCTGTAAG GCTCGAACAA GATGCGGCGC AGCCCAATCA GATCGGGCTG AAATGGAGCG CGTTGGTGCC GTGGAGCAAC AATAACCGCG TTCATCGGAT TTACCGCGAG GACAAAGCCC GGCCCGGCAC GTTCAACCGC ATTGCGGAAG TATCAGTGCA GGGACCGCAA ACGTTCAGTT TCGTGGATGA CGGCACCGAC CAGTATGCTG CCGATGGCGT CGTGAATGTG AGTATTGCCA AAGACTCTAC CTATTGCTAC AAAGTGGAGA CGGTGGGCTC TTACAATAAC AGTCAGATCA AACCGGCCGT ATTGTATAAT TTTTCTCAAA TCCTTTGCAT TTCACCATCG GATACGATTA AGCCCTGTCC GCCGGTGCTG AGCCTCGATC CGCTCAATTG CGACTCGCTT CAAAACATTC CGCAGGCGTT CTGCAACACC ATCGGATTCA CCAACCACCT CACGTGGCAA TATCCCCAGC AAGCCGGCGG CCGTGACTGC GACCCGCTCG TGACCGCCTA CCGCGTGTAC TATGCAAGAT ATGAGGGCGA CACGCCAACG CTCATCACGA CCATCACTAC CCCGCCGTCG CCGCTGCAAA CGGCTTATGA CCACGAGGGA CTGACGTCTT TTGCCGGGTG TTATTATGTG ACGGCCGTCA ACAAATTCGG GACCGAGAGT GCGCCGAGCA ACACCGTTTG CAGGGACAAT TGCCCGATGT ATGTTTTGCC CAATGTATTC ACACCGAACG GCGATGCCAA AAACGACATT TTCCAACCTT ATGAATGCCC GGCATTTGTA CAATCCCTGG AATTCAAGGC ATTCAACCGC TGGGGTGCGG AGGTGTTTTC GACCAGGGAC GTGAATATCA ATTGGGACGG TAAAACGAAC GGGGGGAAAG AGCTTGCGGC CGGCCAATAC TACTACGAGC TGACGATCTA TTTTGAATCA TCCAAAAAAC AGGGCACCGA GACGAGCATG AAAGGCTGGG TACAGTTGCT GAGGTAG
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Protein sequence | MIRPLSARIL LVILMLTLAF SQAFATHFRA GEITARRMSL TSHIYEIKVT GYFDMVSGKD AADRQTSVFF KIGNVQSTGT PVTIEAPRIM PIVDIGNNTT MNTYIATYTF PTTGAYRISM EVDARNDGVL NIGPEPTNRL NFYVSTVLEI NATFGLNRTP VLRNAPIDLA AVGQRYIHNP GAFDADGDSI AYRMFTPQQA GANGVGVNLE YQDPNTVTPP GQTETGGSPA TFAINRVTGD IIWNAPVTKG YYNVAFVVEE WRDGALIGQI VRDMQIIVDD VRNDRPAVPP LPDICVEAGT LINQRVTATD RNGDRLNLTS ASGVYDPTLI KPAVASFTVS GQGSQSSVTG TFVWQTSCEH IRLEPYNVLF KVEDAAPPGY PNPSLFRKLA DMTTWNIRVY GPKPTGLKGV AATDPAGTAY RLTWDAYKCQ IAGAKIAIYR AEQCTDIPDD VCSPGIPAGS GYQEIGRVDV DETTFLDNNN GDGLRPGVSY SYRIVVLFPR PGASPGEPGY LIGGGESIAS PEFCLNLPVV MPVITNVTVD STSTTKGVIT VKWMRPAAAA GLPAQYRLFR ATGQNGTAFT QIATINTNLA AGARDTLFVD RNLDTEANAY NYKLEYYTTV NGQLTKFDET KTASSVRLEQ DAAQPNQIGL KWSALVPWSN NNRVHRIYRE DKARPGTFNR IAEVSVQGPQ TFSFVDDGTD QYAADGVVNV SIAKDSTYCY KVETVGSYNN SQIKPAVLYN FSQILCISPS DTIKPCPPVL SLDPLNCDSL QNIPQAFCNT IGFTNHLTWQ YPQQAGGRDC DPLVTAYRVY YARYEGDTPT LITTITTPPS PLQTAYDHEG LTSFAGCYYV TAVNKFGTES APSNTVCRDN CPMYVLPNVF TPNGDAKNDI FQPYECPAFV QSLEFKAFNR WGAEVFSTRD VNINWDGKTN GGKELAAGQY YYELTIYFES SKKQGTETSM KGWVQLLR
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