| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3954 |
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| Symbol | |
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| ID | 8227549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4800445 |
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| End bp | 4801557 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644931795 |
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| Product | GDP-mannose 4,6-dehydratase |
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| Protein accession | YP_003088323 |
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| Protein GI | 255037702 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAG CGCTAATTAC AGGGATCACC GGCCAGGATG GCTCCTATTT GGCCGAGCTC
CTTTTGAGCA AGGGATACGA GGTACATGGT ATCAAACGCC GCAGTTCGTT GTTCAACACC
CAGCGGATCG ACCATATTTA CGAAGACCCG CATGAGAAAA ACGTGCGCTT TCACCTTCAT
TACGGCGACC TGAGCGATTC GACGAACATC ATCCGGATCA TCCAGGAAGT GCAGCCCGAC
GAGATATATA ACCTCGGCGC CATGTCGCAC GTGCAGGTAA GTTTCGAAGA ACCTGAATAC
ACTGCCAACG TCGACGGCAT CGGAACGCTC CGCATCCTCG AAGCCGTTCG TTTGCTGGGG
CTTACCGAAA AAACCAAAAT ATACCAGGCA TCTACTTCCG AACTGTACGG ATTGGTGCAG
GAAGTGCCGC AATCGGAGCG TACGCCGTTT TATCCCCGCT CCCCGTATGC AGTGGCCAAG
CTTTATGGTT ACTGGATCAC TGTCAACTAC CGCGAGGCGT ATAATATGTT TGCGGTGAAC
GGGATTTTGT TCAACCACGA ATCTCCTTTG CGTGGTGAAA CTTTCGTAAC ACGCAAAATC
ACCCGCGCCG TTGCCCGTAT CGCATTGGGC TTGCAGGATA AAGTGTTCCT CGGTAACCTC
GACGCGCAGC GCGACTGGGG CCACGCAAAA GACTTCGTGG AAGCCATGTG GCTCATTCTG
CAACAGGAAA CACCGGAGGA TTTCGTGATT GCGACGGGTG TTACCACGCG CATCCGCGAG
TTCGTGAGAA TGGCATTTGC CGAAGTAGGC ATTGAAGTCG AATTCACAGG AGAAGGCGTG
AACGAAATCG CGAAGGTCGT AAAATGCAAT AATCCCGAGT TCCAGGTGGA AGTCGGCAAA
GAAGTAGTGG CGGTTGACCC ACGTTACTTC CGTCCGACCG AAGTGGAATT GCTGATCGGC
GATCCAACGA AATCCATGGA GAAATTGGGC TGGAAACCGA AATACGACCT CAAAGCGCTC
GTGAACGACA TGGTTGCGGC CGACGTGCAG CTGTTCCGCA AGGACCGTTT GCTGGAAAGC
AGCGGCCACC GCGTTCCAAA CTACTACGAA TAA
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| Protein sequence | MKKALITGIT GQDGSYLAEL LLSKGYEVHG IKRRSSLFNT QRIDHIYEDP HEKNVRFHLH
YGDLSDSTNI IRIIQEVQPD EIYNLGAMSH VQVSFEEPEY TANVDGIGTL RILEAVRLLG
LTEKTKIYQA STSELYGLVQ EVPQSERTPF YPRSPYAVAK LYGYWITVNY REAYNMFAVN
GILFNHESPL RGETFVTRKI TRAVARIALG LQDKVFLGNL DAQRDWGHAK DFVEAMWLIL
QQETPEDFVI ATGVTTRIRE FVRMAFAEVG IEVEFTGEGV NEIAKVVKCN NPEFQVEVGK
EVVAVDPRYF RPTEVELLIG DPTKSMEKLG WKPKYDLKAL VNDMVAADVQ LFRKDRLLES
SGHRVPNYYE
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