| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3928 |
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| Symbol | |
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| ID | 8227523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4776316 |
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| End bp | 4777188 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644931769 |
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| Product | integrase family protein |
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| Protein accession | YP_003088297 |
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| Protein GI | 255037676 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAACGC CGTTTCTGGA ATTCCTCCAA TTCGAAAAGC GCGCCAGTGC GCACACGATT
AAATCGTACC AGACTGATCT CGAACAGTTT CAGAAATACC TCCTTTTTCA ATACGAATGC
AATGAACCCG AAACGGCTAA GGCGCCCATG CTGCGCTCCT GGGTAGTGAG TATGATGGAG
GAAGGGCTTA ATCCGTCGTC CATTAACCGC AAAATCGCGG CACTCCGTAC GTTTTATGGC
TATTTGAGGA AAAAAAAGCA CATCGATTCC GATCCGACCA AAATACTTTC TGCATTAAAA
ACCCGTAAAA AACTGCCTGC ATTCGTGGAA GAGAAGTCCA TGGAACTGCT GTTTGAAGAA
GGCGTATTTT CAGAAGATTT CAGCGGGCTG CGCGACCGGG TGATCATGGA ACTGCTCTAT
GGCAGCGGCA TCCGGCTGTC GGAACTGGTG GAGCTGGAAT TGAAGGATTT GAATTTGCCG
GCGCGGACGA TCCGGGTTTT CGGGAAGCGG GCAAAGGAAC GGATTGTGCC CGTTTCCACT
TCCCTGGCGC AATTGCTTCA CAAATATACG GAGCAGCGCG CGCCGGAGGA AGATACCGAT
GTGCTGCTTT TAACCGACTC AAACAAAGCC ATTTACCCGG TTTTTGTGCA GCGGAAAGTA
AAGCAATACC TTTCCGCCGT CACCACCCTT TCCCAGAAAA GCCCGCACGT GCTCCGGCAC
ACCTACGCCA CGCATTTGCT CAACCGCGGC GCCGATCTGA ATGCGATCAA GGAGTTATTG
GGCCATGCCA ACCTGGCCGC TACGCAAATT TACACCCACA ACTCCATCGA AAAGCTTAAA
AAAACGCATC AACAAGCGCA CCCCAAAGCC TGA
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| Protein sequence | MITPFLEFLQ FEKRASAHTI KSYQTDLEQF QKYLLFQYEC NEPETAKAPM LRSWVVSMME
EGLNPSSINR KIAALRTFYG YLRKKKHIDS DPTKILSALK TRKKLPAFVE EKSMELLFEE
GVFSEDFSGL RDRVIMELLY GSGIRLSELV ELELKDLNLP ARTIRVFGKR AKERIVPVST
SLAQLLHKYT EQRAPEEDTD VLLLTDSNKA IYPVFVQRKV KQYLSAVTTL SQKSPHVLRH
TYATHLLNRG ADLNAIKELL GHANLAATQI YTHNSIEKLK KTHQQAHPKA
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