Gene Dfer_3905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3905 
Symbol 
ID8227500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4751616 
End bp4752122 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content50% 
IMG OID644931746 
Productprotein of unknown function DUF192 
Protein accessionYP_003088274 
Protein GI255037653 
COG category[S] Function unknown 
COG ID[COG1430] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0679717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC GGCAGTCGGT TTTTGCATTC ATACTTTTGG CGGCATTCGT GCTGGGTGGC 
GTCGCTTACC TGGCCGGGTC ATTTTCCGGC GGAGATAAAA CCGCCGAAAC GCCGGCCGCA
GGGCCCGCAC CCGTTTTTGT GAAGGAAGGC GAAGTGTCAT TTCTCAGAAA GGGTGAGACT
TATAAAAAAA TCGATGTCGA AATAGCGGAA AACGAGGCGG AGCGAAATAA AGGCCTGATG
TTCCGGCCCT ACCTGCCCGA TTCGGTAGGT ATGCTCTTCA TTTTCGAGCA GCCGGATACG
CATTCGTTCT GGATGAAAAA CACGTCGATC CCGCTCGACA TTATATATGT AGGCCCGGAC
AAAACGATCG TTTCCATTGC AGAGAACACC CGGCCCTATT CAGAAGCAAG CATCCCGCCA
AATGGTATCG TACAGTACGT GGTGGAGGTG AATGCTGGTT TTACAAAAAA TAACAATATT
CAGTCAGGAG ATGCCATTTC TTTCTAA
 
Protein sequence
MKKRQSVFAF ILLAAFVLGG VAYLAGSFSG GDKTAETPAA GPAPVFVKEG EVSFLRKGET 
YKKIDVEIAE NEAERNKGLM FRPYLPDSVG MLFIFEQPDT HSFWMKNTSI PLDIIYVGPD
KTIVSIAENT RPYSEASIPP NGIVQYVVEV NAGFTKNNNI QSGDAISF