Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3817 |
Symbol | |
ID | 8227411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 4656285 |
End bp | 4657643 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644931657 |
Product | aspartate kinase |
Protein accession | YP_003088186 |
Protein GI | 255037565 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0527] Aspartokinases |
TIGRFAM ID | [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00114248 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.367639 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTCT GGAAATTTGG CGGTACTTCG GTAGGGAAGC CTGAGCGTAT GCACTCAATC CGCGAACTCC TCAACAATGA TCCTAATCGT AAAATCGTGG TTTTGTCGGC TTTGTCCGGC TCGACTAATG CGCTGATCGC TATCGGAGAA GCGGCCAAAT CGTATGACGA TGCCAAGGCT GCGGCTTTGA TTGAAGAGTT GAAAAATCAT TACGATCTGT TTATCAAAGA ACTGTATTCA ACGCCGGAAG GCTTGGCAGC TGGTCAGCAG ATCGTGGATT CCGAGTTCGG GTTTATCAAA TCCGTGGTAA GCGTGAAGCC TTTTACCATT AAACAAGAGA AAGAGCTCGT TGCGGAAGGT GAAATATTGA GTACCAAAAT GTTCCAGGCA TACCTGGAAG AAAAAGGCGA AAGCTCGGTG TTGCTGCCTG CATTGGATTT CATGCGCATC GACGCCGACG GCGAGCCGGA ACTGGCGACA ATCGAGGAGA AATTGGTGAC GATTTTGAAC CAATATACCG ACAAGCAAAC GATCGTAACC CAGGGCTTCA TTTGCCGCAA CCCGCGCGAA GAAGTGGATA ACCTGAAAAG AGGAGGTTCC GATTACACGG CATCACTCAT CGGTGGCGCC ATCCGTGCGG ACGAGATCCA GATCTGGACC GACATCGACG GAATGCACAA CAACGACCCG CGCATTGTGA AGCGTACCTT CCCGATCCGC GAGCTGACGT TCGAAGAGGC AGCCGAGCTG GCGTACTTCG GTGCGAAAAT CCTCCACCCA AGCACCATTA CGCCTGCCAA ACTGCGCGGT GTACCGGTTC GTTTGAAAAA CACCATGCAG CCCGAAGCAC CTGGAACGCT CATCGCGACC CAGACTTCCG ACCGCGACAT CAAAGCCATT GCCGCGAAAG ACAATATCAC GGCGATCTAC ATTCACTCGA CGCGTATGCT GAATGCTTAC GGCTTCCTGC GCAGGGTGTT TGAGATCTTT GAGAAATATA AAACACCGGT GGATATGATC ACGACGTCCG AAGTATCGGT GTCGGTAACG ATCGATAACT CCGAAAACCT GGAACAGATT AGTGCCGAAT TGCGCGAATT TGCTGATTTA GAGGAACATG ACCGTGATCA GAACATCATT TGCATCGTTG GTAATTTCAG CGCCGACAAA GAAGGTATCG CCCTGAAAGT GCTTGATGCA ATGAAAAACA TCCCGATACG AATGATTTCG TACGGTGCGT CGGAGCATAA CCTGTCATTG CTGATCCATT CAAAATACAA AGCGGAAGCA TTGAATGTCC TCAACGAGCG CCTGTTCTTT TACGAGGACG CGATGAAGGA CATTTTCACG GCTCCCTGA
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Protein sequence | MQVWKFGGTS VGKPERMHSI RELLNNDPNR KIVVLSALSG STNALIAIGE AAKSYDDAKA AALIEELKNH YDLFIKELYS TPEGLAAGQQ IVDSEFGFIK SVVSVKPFTI KQEKELVAEG EILSTKMFQA YLEEKGESSV LLPALDFMRI DADGEPELAT IEEKLVTILN QYTDKQTIVT QGFICRNPRE EVDNLKRGGS DYTASLIGGA IRADEIQIWT DIDGMHNNDP RIVKRTFPIR ELTFEEAAEL AYFGAKILHP STITPAKLRG VPVRLKNTMQ PEAPGTLIAT QTSDRDIKAI AAKDNITAIY IHSTRMLNAY GFLRRVFEIF EKYKTPVDMI TTSEVSVSVT IDNSENLEQI SAELREFADL EEHDRDQNII CIVGNFSADK EGIALKVLDA MKNIPIRMIS YGASEHNLSL LIHSKYKAEA LNVLNERLFF YEDAMKDIFT AP
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