| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3805 |
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| Symbol | |
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| ID | 8227394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4633960 |
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| End bp | 4635747 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644931640 |
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| Product | Tetratricopeptide domain protein |
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| Protein accession | YP_003088174 |
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| Protein GI | 255037553 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00975228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.247571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGGAT TTCTGCTTTC CGGGGCGGCC GCGGCGTTCG GGCAGGGGGA GCGGGAGCTG
GCCGAGGAGT ATTTCAAAAA CGGGGACTGT CCGAAGGCGC TTAGTTATTA TTCTTCTTTT
CTGAAAAATT CATTCGAGAA GATCTCGCTT AAGAATTATA CGAGCTGCAT TGTGAAGAGC
AAGACCTGGG GCGATGGCGA GCAATTTTTC AAAAAGCAGA TCAAAGGCGA TCCCAACAAT
GCAGCATGGT ATTACCTGAA CTGGGGCATT ATGCTTGAGA ATCAGGGGAA GGCCGTGGAG
GCGTCCAAAC GGTACGAGCA AGTCATTACC GCATCGGGAG CCAGAACGGA GCTTAAACGT
GATCTTGCGG AGGAATTCAG GGCACAAAAC CAATCGGAAT GGGCCAAAAA TATCCTGCTC
GAAGCTAGAC AAAGTGCGAA GCGCTACGAC ATATTCCAGC TGGAACTAGC CAGCGTTTAC
CGCGACCTGA ACCAGCCCGA AAAGATGATC GACGAGCTGC TTTCTTACGG CATGCGCTAT
CAGAATACGG AGGTCGTTCA GAATATGCTT CAGGACTTTA CCAAGGACGA GAAGGAGCAG
GCTTTGCTGG AAAAGGTACT ATATGATAAG ATCCAGAAAT TTCCGCAGGA AGGCTTCTAC
AATGAACTGC TGATCTGGTA CCAGGTGCAG CGCAAGGATT TTTACAAGGC ATTCATCCAG
GAACGTGCGC TCGACAGGCG TTTCAAACAC AACGGTGCAC GGCTCTACAA CCTTGGCATG
CTGGCCTTGC AGAACAATGA TTATACCAAT GCCGGCAATA TATTCGATCA CCTGGTCAAG
GAATATCCGA AGGGCCAGCT ATATCCGGTG GCCCGCAGAA TGGCCATTTT CGCGCGGGAA
GAGCAGGTTA AAAATACCTA TCCCGTAAAG CGGAGCGAGG TGCAAAAGCT GCTGGGGCAA
TATCAGCAGT TGGTGGACGA ACTGGGCGTG AATGTGCGCA CGATCGAGGC ATTACGGAAC
ATGGCGATTT TGAATGCATT CTATATGGAT GATTTCAAAA AGGCCATTGA AATACTACAG
AAGGCGATTG AAGCAGGCAA GGCGGAGAAG AACTTCGTGG ACAAATGTAA GCTCGATCTG
GGCGATATTT ACCTCTTGCA AGGTGAGCCC TGGGAGGCGA CATTGGTGTA TTCGCAGGTA
GAAAAATCTC AGAAGGACGA TGTGCTCGGA TACGAAGCTA AATTACGGAA CGCCAAGCTT
CATTATTTTA AAGGCGAGTT TGAGTTAGCA AAAGCAGTTT TGGATATCCT CAAAAAAGCA
ACTACCCGCG AGATTGCCAA CGACGCCAAC GAGCTCTCCC TCTTAATCAT GGACAACACC
GGTCTGGACA GCAACGAGAC AGCCATGAAG GCCTATTCGT CCGTGGAGTT GCAACTTTTC
CAAAATAAGA AGTTCGAGGC TATCGATACT TTGAAACAAC TTTACAAAAG GTACGAAAGC
CATAGCCTGG CTGACGAAAT TCTTTGGCTT ACTGCGAAGA CTTACATCAA GCTCGACAGC
AACCAGCAGG CGATGACGGA TCTGAAATTG TTGTATTCCA AATTTGGACA CGACCTGTAT
GGCGACGACG CGCTGTTTGC GATGGCGAAA CTTTACCAGG AAAAACTGAA TGACAAGGAC
CAGGCGATGA AGATGTATCA GGAGCTGATG GAAAAATATC CCGGCAGCAT TTTCGTCGCC
GAGTCGCGGA AGCGCTTCCG GATTTTGAGA GGTGACGTGA TTAACTAG
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| Protein sequence | MIGFLLSGAA AAFGQGEREL AEEYFKNGDC PKALSYYSSF LKNSFEKISL KNYTSCIVKS
KTWGDGEQFF KKQIKGDPNN AAWYYLNWGI MLENQGKAVE ASKRYEQVIT ASGARTELKR
DLAEEFRAQN QSEWAKNILL EARQSAKRYD IFQLELASVY RDLNQPEKMI DELLSYGMRY
QNTEVVQNML QDFTKDEKEQ ALLEKVLYDK IQKFPQEGFY NELLIWYQVQ RKDFYKAFIQ
ERALDRRFKH NGARLYNLGM LALQNNDYTN AGNIFDHLVK EYPKGQLYPV ARRMAIFARE
EQVKNTYPVK RSEVQKLLGQ YQQLVDELGV NVRTIEALRN MAILNAFYMD DFKKAIEILQ
KAIEAGKAEK NFVDKCKLDL GDIYLLQGEP WEATLVYSQV EKSQKDDVLG YEAKLRNAKL
HYFKGEFELA KAVLDILKKA TTREIANDAN ELSLLIMDNT GLDSNETAMK AYSSVELQLF
QNKKFEAIDT LKQLYKRYES HSLADEILWL TAKTYIKLDS NQQAMTDLKL LYSKFGHDLY
GDDALFAMAK LYQEKLNDKD QAMKMYQELM EKYPGSIFVA ESRKRFRILR GDVIN
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