Gene Dfer_3794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3794 
Symbol 
ID8227383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4620686 
End bp4621336 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content47% 
IMG OID644931629 
ProductPhosphoribosylanthranilate isomerase 
Protein accessionYP_003088163 
Protein GI255037542 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA AAGTTTGCGG ATTGCGCCAG CAAGGCAACA TCGAGCAGGT AGTGGCCTTA 
CAACCCAACT TTATAGGGTT TATTTTCTAT GACAAGTCGC CGCGCTTCGT AGGTGAGGAA
CTGGACGAGG AATATATCCG CAGCATCCCT CAAAACATCA AGAAAGTAGG TGTGTTTGTA
AATGCAAACC CTGGCCACAT TTTGAATATG GTCAAAAAAT ACGACCTGCA ATATGTGCAG
CTGCACGGCA ACGAAATTCC CGACATTTGC CGGAGCATCC GCCAGAAGGG CGTAAGCGTG
ATCAAGGCGT TCTCGATCGA CGAGAAATTC AATTTTGCCA TGCTGAACAA TTATAAGTCC
TTTTGCGACC TGTTTTTGTT TGATACAAAA GGCGATCAGC CGGGCGGCAA CGGTACGGCA
TTCGACTGGA AACTTTTGGG CAAATACGAT AACGAAAAGC CATTCCTCCT CAGCGGCGGC
ATCGGCCTCG AAAACATCGA AGAGATTATC ACATTATCCC AGACACTCCC CATTTACGGC
ATCGACGTCA ACAGCAAGTT TGAAACCGAG CCAGGCGTGA AGGACATTGC CAAGCTGGAA
GAGTTATTTA GTTTACTTCG CGTAAAAGAA CAAGAAGAAG CGGAAGCTTA A
 
Protein sequence
MKIKVCGLRQ QGNIEQVVAL QPNFIGFIFY DKSPRFVGEE LDEEYIRSIP QNIKKVGVFV 
NANPGHILNM VKKYDLQYVQ LHGNEIPDIC RSIRQKGVSV IKAFSIDEKF NFAMLNNYKS
FCDLFLFDTK GDQPGGNGTA FDWKLLGKYD NEKPFLLSGG IGLENIEEII TLSQTLPIYG
IDVNSKFETE PGVKDIAKLE ELFSLLRVKE QEEAEA