| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3780 |
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| Symbol | |
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| ID | 8227366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4597518 |
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| End bp | 4599446 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644931612 |
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| Product | ATP-dependent DNA helicase, RecQ family |
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| Protein accession | YP_003088149 |
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| Protein GI | 255037528 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATA TCCGGTCTGT CCTGAAACAA TATTGGGGTT ACGACGCATT CAGGCCATTT
CAGGAAGACG CCATTCAGGC CGTCCTGAAT GGCATGGATA CGCTCGTGCT GCTGCCTACC
GGCGGCGGCA AATCCATTTG TTTCCAGGTA CCGGTGATGG CCTCCAAGGG TGTGTGCATT
GTGGTAACGC CGCTGATCGC CCTTATGAAA GACCAGGTGG AGCAGCTCAA ACGCAGGCAT
ATTCCCGCCG CCGCGATCCA TTCGGGCATG AGCAAGACCG AGATCGATAT TACGCTGGAT
AATTGCATTC ACGGAAATAC GAAGTTTCTC TACGTGTCGC CCGAGCGCCT GCGGACGGAC
ATTATGATTG CCCGCACGAA GCAAATGAAG GTTTGCCTGC TTGCGATCGA CGAGGCGCAT
TGTATTTCGG CCTGGGGTTA CGATTTCCGC CCCTCCTACC TGCTCATCGC CGATTTCCGG
AAGCTTTTAC CCAAAGTGCC GGTAATGGCG CTCACCGCCA CCGCTACGGA AGAAGTGCGG
GCAGACATCC TCGATAAGCT CGAAATGCGC AATGCGCGCG TTTTCAAGCA GTCGTTTGCA
CGTGCCAACC TCTCCTACTC GGCATTTGCG GAGGAAAGTA AGGAACGAAA ATTATTGCAG
GTTTTGCGTA ATGTTTCGGG AACGGCCATT GTATACGTTC GCACCCGGAA GCGCACCAAA
GACCTCGCTG ACTGGCTCTC GAGGCAGGGA ATTTCGGCCA CCAGCTACCA CGCCGGACTG
CTTTTTAAGG ACCGCTCTGA CCGGCAAACG GCCTGGATTC AGAACCGGGT GAGGACCGTC
GTGGCCACAA ATGCCTTCGG GATGGGGATC GACAAGCCCG ATGTCCGCGC CGTGGTGCAT
TTCGACCTGC CCGACAATCT GGAAGCCTAT TATCAGGAAG CCGGCCGGGC CGGAAGGGAC
GAAAAAAAGG CCTATGCCGT CGCATTGTTC AACAAAATCG ACCTCGAGGA GCTCGTCGAC
AGCGTGGAGC GACGATACCC GCCCATTGAA ATGCTCCGGC GCGTTTACCA GGCCCTGGCG
AATTATTACA AAGTGGCCGT CGGTGCGGGC GAGCTATCGG GTTTCGACTT CGATATCCAG
GAATTTACAG GCATATTCGG GCTGCCGGTG AATGAAACGC ATTATGCGTT GAAACTGCTT
GAAGAAGAAG GTTTTGTGCA GCTCAGCGAG AATTTTAGTG ATGCTTCCAA AATCCATTTT
CTGGTGGATA ACCGCCAATT GTACGATTTT CAGATACGCT ATCAGGAGCT GGATTCGTTT
ATCAAACTGA TCCTGAGAAT GTACGGCGGC GAGCTTTTTA CGGAGTATGT GCGCATTTCG
GAAACCGAGC TGGCGCAGGT GCATTTCGCC ACGGTGCCCG AAGTTCTGAG GAAGCTGAAA
TTCCTTGCCG AGCGGGACAT TATCGATTAC GAACCCCGCA AGGACAAGCC CCAGCTCACA
TTTCTGACAC CGCGCTATGA TTCTTCTTTA CTGCCGCTGA ATGTTTTTGA AATACAAAAG
AAAAAGGACC GCGACCTGCA AAAGGCACAA GCGGTGATCC GTTACGCGTC GCATACCAAA
CGGTGCCGGA CCTTGCTTTT ACTGGAATAT TTTCATGAAT TCGATGCGGA GGAATGCGGT
GTGTGCGATA TATGCATTCA AAACCGGAAA AATGAGGCCC GCGACGCTGC GGAGGACGCC
ACTTTGGCCG GAATGATCAC CGATTTTCTA ACCCGTGAGG GCCCGATGTT GCCCGCTGAA
CTTGGCCGTG CATTCGAAAA CCTGCCCGGC GACGAGTTGT TCAATACATT ACAAACGCTG
ATCCGGGAGG AAACGATCCG GTATAATGAA CAAGGAATGC TCACCGCGAC TAACAAAACT
CAACTTTGA
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| Protein sequence | MTDIRSVLKQ YWGYDAFRPF QEDAIQAVLN GMDTLVLLPT GGGKSICFQV PVMASKGVCI
VVTPLIALMK DQVEQLKRRH IPAAAIHSGM SKTEIDITLD NCIHGNTKFL YVSPERLRTD
IMIARTKQMK VCLLAIDEAH CISAWGYDFR PSYLLIADFR KLLPKVPVMA LTATATEEVR
ADILDKLEMR NARVFKQSFA RANLSYSAFA EESKERKLLQ VLRNVSGTAI VYVRTRKRTK
DLADWLSRQG ISATSYHAGL LFKDRSDRQT AWIQNRVRTV VATNAFGMGI DKPDVRAVVH
FDLPDNLEAY YQEAGRAGRD EKKAYAVALF NKIDLEELVD SVERRYPPIE MLRRVYQALA
NYYKVAVGAG ELSGFDFDIQ EFTGIFGLPV NETHYALKLL EEEGFVQLSE NFSDASKIHF
LVDNRQLYDF QIRYQELDSF IKLILRMYGG ELFTEYVRIS ETELAQVHFA TVPEVLRKLK
FLAERDIIDY EPRKDKPQLT FLTPRYDSSL LPLNVFEIQK KKDRDLQKAQ AVIRYASHTK
RCRTLLLLEY FHEFDAEECG VCDICIQNRK NEARDAAEDA TLAGMITDFL TREGPMLPAE
LGRAFENLPG DELFNTLQTL IREETIRYNE QGMLTATNKT QL
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