| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3775 |
|---|
| Symbol | panB |
|---|
| ID | 8227361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 4591849 |
|---|
| End bp | 4592667 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644931607 |
|---|
| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
|---|
| Protein accession | YP_003088144 |
|---|
| Protein GI | 255037523 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
|---|
| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTAC ATACTGCTGA TATTAAGCGC ATTACAACCC ACGTGATTCA GGAAATGAAG
AACCGTGGCG AAAAAATAAC CTGCCTTACC GCCTATGATT ATTCGATGGC GGGCATTGTG
GACGCCGCGG GCGTCGAGCT GATCCTGGTG GGCGACTCGG CTTCCAATGT GATGGCCGGC
CACGAAACGA CGCTGCCGAT CACGATCGAC CAGATGATCT ACCACGCCTC GTCGGTAGTG
CGGGCTGTGA AGCGTGCATT GGTGGTGGTG GACCTTCCTT TTGGCTCCTA TCAGGGCAAT
TCGCGGGAGG CGCTCAACTC TGCCATTCGC ATCATGAAAG AATCGGGTGC GCATGCCGTG
AAACTGGAAG GCGGGCTCGA AATCAAGGAT TCTATTACGC GCATCCTCAG CGCCGGTGTG
CCTGTAATGG GGCATTTGGG GCTTACCCCG CAATCCATTT ACAAATTCGG GACTTACACC
GTGCGTGCGA AACAGGAAGC AGAAGCACAG AAATTGCTGG AAGACGCCAA GATGCTCGAA
GAAGTCGGCT GCTTTTCGGT CGTACTCGAA AAAATTCCTG CAAAACTGAC CAAGCAAGTG
TCGGAAAGCA TTCAGATTCC GACCATCGGG ATCGGCGCCG GGCCGCATGC CGACGGACAG
GTGCTGGTGA TTCACGATCT GCTGGGCATC AATAAGGAAT TTAAACCGCG CTTTTTGCGT
CATTATGCCG ATTTGAATAG CGTAATGACC AACGCGATCA CTAATTATAT TTCAGACGTA
AAAGGAAAAT CATTTCCGAA CGAATCGGAA TCATATTGA
|
|---|
| Protein sequence | MSVHTADIKR ITTHVIQEMK NRGEKITCLT AYDYSMAGIV DAAGVELILV GDSASNVMAG
HETTLPITID QMIYHASSVV RAVKRALVVV DLPFGSYQGN SREALNSAIR IMKESGAHAV
KLEGGLEIKD SITRILSAGV PVMGHLGLTP QSIYKFGTYT VRAKQEAEAQ KLLEDAKMLE
EVGCFSVVLE KIPAKLTKQV SESIQIPTIG IGAGPHADGQ VLVIHDLLGI NKEFKPRFLR
HYADLNSVMT NAITNYISDV KGKSFPNESE SY
|
|---|
| |