Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3744 |
Symbol | |
ID | 8227329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 4560082 |
End bp | 4561482 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644931575 |
Product | beta-lactamase domain protein |
Protein accession | YP_003088113 |
Protein GI | 255037492 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000226651 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATCC AATTCTTTGG CGCCGCACGC ACCGTTACCG GAAGCAAGCA CCTCATTACC ACTGAAAAAG GAACAAAAGT ATTGCTCGAC TGCGGGCTTT TCCAGGGCAT TCAAACCGAC GAATTCAACC AGGAATTCGG CTTCAAACCT GCTGATGTCG ACTATGTGAT CCTTTCACAC GCGCACATCG ACCACTCGGG GCTGCTCCCG CGCCTGGTGC GCAAGGGCTT CAAAGGACCA ATTTACTGCA CCGCCGCCAC TGCCGACCTT TGCCGCGTAA TGCTGCTCGA CAGCGCCCAT ATCCAGGAAA AAGACCTTGA ACGCATCAAT AAGCGCCGCC AAAAACAGGG CCGCCCGCTG CTGGAAGAGC TTTATAATGC CGAAGACGCC GCGCAGGCGT TGAGCCTTCT CAAAACCGTT CGTTACGGGC AAACTTTCTT TTTGGGCGAA GAAAACGAAA TTTCCGTATT CCTGACCGAC GCCGCGCATT TGCTGGGCAG CGCCGCCGTG CATTTGAGCA TTCCTGATGG CGGCACATTT AAACAAGTGA CTTTTACTGG CGACATCGGC CGACCTGAGG ACCGCATTCT ACGCAAACCG GAACCATTTC CGCAGGCCGA TTACATCATT TGCGAATCGA CTTACGGCGA CCGGCTGCAC GAAAAAGAGA TTGATATGCA TGCGCATTTG CTGCGCATTG TGCAGGAAAC CTGTGTGCGC CGCCGCGGTA AACTGATCAT CCCGGCCTTC GCAATCGACC GCACGCAGGA GCTCATTTAC GCGCTCGACC AGCTCTCGAG CTCGGGCCAG CTTCCTCAAA TCCCGGTGTA CATCGACAGC CCGCTGGCGA TCCGCGCGAC GGCGATCATG AAGGAACACG ACGAATGCTT CAATCCCGAA ATCCTCGAAT ACATCGAGAA AGACGGCGAC GCGTTCGCAT TTCCGTACCT GAATTACATT TCGGACGTGC AGGAATCCAT TGCGCTCAAC GATCGCAAGG AGCCCTGCAT CATCATTTCC GCCTCGGGAA TGGCCGAAGC GGGGCGCATT AAGCATCATA TTAAAAACAA CATCGGCGAC CCGGACTCGA CGATCCTGCT CGTCGGCTAT GCCTCTGCCA ACACGCTTGC GGGCGCATTG AAGCGCGGCG ACAGGCAGGT AAACATTTTC GGGGAGCGCC TGGATGTGAA GTGCCGCGTC GAAACGATGG ATTCCTTCTC CGGCCACGGC GATTACAGCG AAATGCTGGA TTTTCTTTCG TGCCAAACGC CGGAGCGGGT GAAGGAAGTG TTCCTCGTCC ACGGCGAATA CGAAACGCAG GTCGCATTCA AATTGAAGCT GGAAAAGGCC GGATTCCGCA AAATCCACAT TCCGGCGCTG TATGAGGGTG TAAAAATTTA A
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Protein sequence | MLIQFFGAAR TVTGSKHLIT TEKGTKVLLD CGLFQGIQTD EFNQEFGFKP ADVDYVILSH AHIDHSGLLP RLVRKGFKGP IYCTAATADL CRVMLLDSAH IQEKDLERIN KRRQKQGRPL LEELYNAEDA AQALSLLKTV RYGQTFFLGE ENEISVFLTD AAHLLGSAAV HLSIPDGGTF KQVTFTGDIG RPEDRILRKP EPFPQADYII CESTYGDRLH EKEIDMHAHL LRIVQETCVR RRGKLIIPAF AIDRTQELIY ALDQLSSSGQ LPQIPVYIDS PLAIRATAIM KEHDECFNPE ILEYIEKDGD AFAFPYLNYI SDVQESIALN DRKEPCIIIS ASGMAEAGRI KHHIKNNIGD PDSTILLVGY ASANTLAGAL KRGDRQVNIF GERLDVKCRV ETMDSFSGHG DYSEMLDFLS CQTPERVKEV FLVHGEYETQ VAFKLKLEKA GFRKIHIPAL YEGVKI
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