| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3689 |
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| Symbol | |
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| ID | 8227274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4488605 |
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| End bp | 4491421 |
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| Gene Length | 2817 bp |
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| Protein Length | 938 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644931521 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_003088059 |
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| Protein GI | 255037438 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.222352 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCCG CGACATTTGC GGACGCAGCA ACGCCCTTTG AGGTGAAAGG GCAATGCATG
CAGAATCCAG ATTGCGAAGC CGACTCAACT TCATTCCGGG ACCCCGTTAT TGACGCTGTC
GCCTGGCGAT GGAATTTTGG GGACGGAAGC GCGACGGACA CCAGGCGAAA TCCGCAACAT
TCCTACATGG CGCCCGGTAC TTACACGGTC ACCCTGGTAA GAACGCTCAA AAGCGGGGCA
ACTGAGACAG TTTCACAGCC CGTACAAATC GGCGAGCTCC CTCCCGAATT TCAGGAATGG
AAAATCGATA CCACCATTTG TAAAGGCGAC ACGCTGATCC TCGATCCTTA TCCCAGCGGA
GCGCCAAGCG GCGCCAAATA TATCTGGTAC CCCAAAGGCG ATACTACTCA GACATTAAGG
GTCGACAGTT CAGGCTGTTA TTCGGTCGAG GTGATTATGC CCAATGGCTG TAAAATCCAG
AATCGGATCA ATGTCAAGAT CTGTATGGAG CCACAGGCGC AGGAAGGTTC CAAGTGGTAT
TTCGGAGGAA ATGCGGGCCT GGATTTTTCC AATACTCCCC CCACACCATT GACGGATGGG
AAGCTGAATA CACCCGAGGG GACCTCGTCC ATTGCCAATT CCAAGGGCCA GTTGCTTTTC
TATTCGGACG GCATCAAGGT CTGGAACAAG AACGGGGATG AAATGACGTG CACGTTCGGG
CCGTGCGCGC CGATGAAAGG CAGCCCGAAT TCCACGCAAT CGGTGCTCAT TGTGCCCCAG
CCCACCTGCC GCGGCTGCGA GTATTTATAT AATGTATTCA CTACCACCGA CATTAATGGA
GAAAAGCTGT TGACGGTAAG CGTAGTCGAT ATGCGCCGGA ACAATGGGTT AGGCCAGATT
ATTGAGCAAA ACACAACGCT CCAACAACCT ACCACCGAAC GCATTGCCTC CGTCCGCAAC
GACCGAGACA GCACTTACTG GGTTGTTTCG CACGATTACG GCACCAATAA ATTCCGCATT
TTCCATGCTA CTACGGGCGG GCTCGTCGAA GTAAGCGCAC CCGAGCTGGG CATGGCGCAC
GATAGCACGA ATAAAGCCGA GGGCTACATG AAATTCTCGT CGCCGGATAG CACCACAGGC
GAGCGCCAAC TGGCTGTGGT AATTCCCGGC CCGGCACGCA ATTATGTGGA GCTGTTTAGT
TTCAACGACT CCACGGGCAC GTTGACCTAC AAAAAAACGA TGGACCTCGG CCCCGCGCCG
CCCATTGCCT ACGGGATCGA ATTCTCCCCG AGTGGCGAAA AAATGTACAT TTCGTTTCAG
AGCGAGAACG GTACAAACTC CCTTTTGAAA CAATACGACC TCTCATTGCC CGATAGTCTG
GTCATAGAAA CGGCCATTAC CATCGACAGT TCCGCCACCC AGAAATACGG CGCATTGCAG
TTCGGGCCGG ATGGCCGTAT TTACATGGCC ATCGAGGGCA GCGAGTACCT GGCAACGATC
GGCGAGCCGG AAGGAAACTC ATTAACAGGC GTCGACTACG AGCGCGACGG AGCCAATCTG
GGCGGTAAAA AGAGCCAGCT TGGGCTACCG AACATGGTGC AGGACTTCAC GCAGGAATCC
TCCGGGCCTG GATTTGAGGC CGACGGATTT TGTACGAATG AACCCACGCA GTTCCAGGCC
AGCCCTATGT GTGATCCGAT AGAAGATAGC TACTCGTGGG ACTTCCTCGG TAATGGGTCG
TTTACAGCTC CTTCCAAAAC GACGACCGCG ACGTACACTT ACACCCAGCC CGGCAAGTAC
ATGGTAGCCA TGCGCGCTAC CAACAAATGT GCCGACACGA CGATCGTGCG GGAGATCACC
ATTTACGAAA CGCCAGCCAA CATCGACCTA GGACCCGATA AGGACACTTG CGGGGCCTAT
GTGCCGCTGG ATATGAAAGT GAATGCGGAA GTGTATGCGT GGATCAACCG CGGACGCGTC
GTAGGCCGTG GACGGACTTA TAATGCCACT TCAACCGGCC GCTACATTGC CATCGCATTC
AACGGCCCGC AGGGAGATTG CTACGCAGCA GACACCATCG AAATCACATT GCGCAAGCCG
CCGGCCTTCT CCATCGGCCC GGATACGACA TTGTGCCGCG ACAGCTCCAT TGTTCTGCGC
GTACAAAGCG ACCGCTGGAT CGAATACAAA TGGAGCACAG GGGAAGACAC CCGTGAAGTG
ACCATTGGTC AGCCCGGGCA ATATAGCGTA GTAGTGAAAG ATCGCAACGA TTGCTACAAT
TCGGACACCA TTCAGGTAGG CGAGCTGCCT TCGCCAATCC TCGGCCTGGC ACCCGAAAAC
TTCATTTGTA TTCCGGATGG CCAATCTGTC ATTCTCGATG CCAACGGGCA AGGGCCGTAT
CAATACCTGT GGCCGCACTC CGGCGATACC ACGCGGACGG TTACCGTCAA CCAGGAAGGG
AAATATACCG TGCGAGCCAC GAATCAGGAG GGCTGCGTGA CGGAACAAAC TACCGACGTG
GTCGATAAAT GCGAGCCGCG GTTCTTCATT CCAGATGCAT TCACGCCCGA CGGAGAAGGC
CACAACGAGA TCCTTGAAGT TTTCGGCGCT TACTATACCA ACTTCTCTAT GCGGATTTAT
AACCGTTGGG GCGAAGTTAT TTTCGCTACT ACCGACATAG AAGCGCGTTG GGACGGAACA
TACAAGGGTT TGAAAGTACA GCCGGGCAGC TATCCGTATG TTGTTTCCTA CGAAGCCCTT
TATTATCCCG AACGCAACCC TACCGTGAAG CGCGGGGCGG TGATGGTGAT CCGGTAA
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| Protein sequence | MLAATFADAA TPFEVKGQCM QNPDCEADST SFRDPVIDAV AWRWNFGDGS ATDTRRNPQH
SYMAPGTYTV TLVRTLKSGA TETVSQPVQI GELPPEFQEW KIDTTICKGD TLILDPYPSG
APSGAKYIWY PKGDTTQTLR VDSSGCYSVE VIMPNGCKIQ NRINVKICME PQAQEGSKWY
FGGNAGLDFS NTPPTPLTDG KLNTPEGTSS IANSKGQLLF YSDGIKVWNK NGDEMTCTFG
PCAPMKGSPN STQSVLIVPQ PTCRGCEYLY NVFTTTDING EKLLTVSVVD MRRNNGLGQI
IEQNTTLQQP TTERIASVRN DRDSTYWVVS HDYGTNKFRI FHATTGGLVE VSAPELGMAH
DSTNKAEGYM KFSSPDSTTG ERQLAVVIPG PARNYVELFS FNDSTGTLTY KKTMDLGPAP
PIAYGIEFSP SGEKMYISFQ SENGTNSLLK QYDLSLPDSL VIETAITIDS SATQKYGALQ
FGPDGRIYMA IEGSEYLATI GEPEGNSLTG VDYERDGANL GGKKSQLGLP NMVQDFTQES
SGPGFEADGF CTNEPTQFQA SPMCDPIEDS YSWDFLGNGS FTAPSKTTTA TYTYTQPGKY
MVAMRATNKC ADTTIVREIT IYETPANIDL GPDKDTCGAY VPLDMKVNAE VYAWINRGRV
VGRGRTYNAT STGRYIAIAF NGPQGDCYAA DTIEITLRKP PAFSIGPDTT LCRDSSIVLR
VQSDRWIEYK WSTGEDTREV TIGQPGQYSV VVKDRNDCYN SDTIQVGELP SPILGLAPEN
FICIPDGQSV ILDANGQGPY QYLWPHSGDT TRTVTVNQEG KYTVRATNQE GCVTEQTTDV
VDKCEPRFFI PDAFTPDGEG HNEILEVFGA YYTNFSMRIY NRWGEVIFAT TDIEARWDGT
YKGLKVQPGS YPYVVSYEAL YYPERNPTVK RGAVMVIR
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