| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3684 |
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| Symbol | |
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| ID | 8227269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4482475 |
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| End bp | 4484160 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644931516 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_003088054 |
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| Protein GI | 255037433 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0646583 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACAG AATTAAACAG ATTTTCGAAG ACCCTTACCC AGGAAGTAAC CAATCCCGCC
GCACAGGCCA TGCTTTATGG AATTGGTTTG AAAGAAGAAG ACTTTGTGAA ACCCCAGATC
GGGATTGCCA GCACAGGATA TGAAGGTAAC CCGTGCAACA TGCACCTGAA CGGCCTTTCG
GTGTATGTGA AACAGGGTGT GACAGCGAAT GATATGGTGG GTCTGATCTT CAACACGATC
GGCGTGTCGG ACGGGATGAC CAACGGTAAC GACGGAATGC GCTATTCGCT GCCAAGCCGC
GACATTATCG CTGATTCGAT CGAAACGGTG GTGGCTGCGC AATGGTACGA TGGTGTGATT
GCGGTGGTGG GTTGTGATAA AAACATGCCG GGAGCCATTA TGGCGATGGC GCGCCTGGAC
CGTCCGGCGA TTATGGTGTA TGGCGGAACG ATCCGCTCGG GGCATTATAA AGGACAAAAG
CTCGACATCG TGTCGGCATT TGAAGCGCTG GGCAAGAAGT TTGCCAACAA TATTTCTGAT
GAAGATTATA AAGGTGTAAT TCAAAATTCG ATCCCCGGCC AGGGTGCCTG CGGCGGTATG
TATACTGCTA ATACGATGGC TTCCTCGATC GAAGCAATGG GATTGAGCCT GCCGTTCAGC
AGCTCTTACC CGGCTACGCA CGAAGGCAAG CAGGAAGAAT GCAAAAAAAT CGGCGCGGCA
ATGAAGAAAT TGCTCGAACT GAACATTACA CCGAAAGATA TTATTACCAA AAAATCACTG
GAAAACGCAT TGACTGTCGT AATGGCGCTC GGCGGCTCTA CCAACGCGGC ATTGCACTAC
CTGGCGATCG CACGCGCGGC GGGTATTCCA TTGACTTTGG ACGACATTCA GGCTATTTCC
GACCGCACGC CGTTTATCGC CGATTTGAAA CCTAGCGGTA AATACTTCAT GGAGGATATC
CTGGAAATCG GCGGTGTTCC TGCGGTAACC AAGTATTTGT ATTCCGTAGG TTTGATCCAC
GGAGATTGCA TTACGGTAAC AGGTAAAACA GTGGCTGAAA ACCTTGCCGA GGCTCCTGAC
TTGAATTTTG AAACACAGAA AATGGTGTTC CCGATCGAAA CACCGATCAA GAAGACCGGC
CACATTCAGG TGCTTTACGG TAACCTGGCT CCCCAGGGTG CGGTTGCGAA AATCACCGGT
AAGGAAGGTC TGACGTTCGA CGGCGAAGCG AAAGTGTGCG AGCACGAATC GGAGATCATC
GATATGCTGG CCAAAGGCGA AATCAAAGCC GGCCACGTGG TGGTGATCCG CAATGCAGGT
CCGAAAGGTG GTCCGGGCAT GTCGGAAATG CTGAAACCAA CCTCTGCCGT AATGGGTGCA
GGATTGGGCG ACAAGATCGC GTTGATCACC GACGGTCGTT TCTCGGGCGG CACGCACGGC
TTCGTGGTAG GTCACATCAC CCCGGAAGCA TTCGACGGCG GCCCTATCGC ATTGGTAAAA
GACGGCGACC GCATTAGCAT CGACGCCAAC ACCCGCGTAC TGACCCTGCA CATTTCCGAC
GAAGAAATGG CAGCCCGCAA AGCCGCCTGG GTACAACCCG CGCCACGCTT TACAAAAGGA
ATGCTGGGAA GATATATCAG AACCGTGAAG TCGGCCAGCG AAGGCTGCGT GACGGACGAA
GCGTAA
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| Protein sequence | MATELNRFSK TLTQEVTNPA AQAMLYGIGL KEEDFVKPQI GIASTGYEGN PCNMHLNGLS
VYVKQGVTAN DMVGLIFNTI GVSDGMTNGN DGMRYSLPSR DIIADSIETV VAAQWYDGVI
AVVGCDKNMP GAIMAMARLD RPAIMVYGGT IRSGHYKGQK LDIVSAFEAL GKKFANNISD
EDYKGVIQNS IPGQGACGGM YTANTMASSI EAMGLSLPFS SSYPATHEGK QEECKKIGAA
MKKLLELNIT PKDIITKKSL ENALTVVMAL GGSTNAALHY LAIARAAGIP LTLDDIQAIS
DRTPFIADLK PSGKYFMEDI LEIGGVPAVT KYLYSVGLIH GDCITVTGKT VAENLAEAPD
LNFETQKMVF PIETPIKKTG HIQVLYGNLA PQGAVAKITG KEGLTFDGEA KVCEHESEII
DMLAKGEIKA GHVVVIRNAG PKGGPGMSEM LKPTSAVMGA GLGDKIALIT DGRFSGGTHG
FVVGHITPEA FDGGPIALVK DGDRISIDAN TRVLTLHISD EEMAARKAAW VQPAPRFTKG
MLGRYIRTVK SASEGCVTDE A
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