Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3635 |
Symbol | |
ID | 8227220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 4432017 |
End bp | 4432814 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644931467 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_003088005 |
Protein GI | 255037384 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.655904 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTAAAAC TTCTTAAATT AGTAATTGTA GCAAGTTTTC TGCTGACCAG CGTCGCCTTT GTCTTTCAGC AAGAACCGGT TACTACGAAA TCGGGAAGCA AGGTTAGTAC AGTTGTAATC GACGCCGGCC ACGGCGGCAA AGACCCCGGC ACCCGGGGCA GGCACACCAA AGAAAAAGAC GTCGCGCTCA AAGTAGCGCT CGAACTCGGC AGGAAGATCA AAGAGGAAAC GCCGGATGTG AAAGTGCTCT ACACGCGCTC TACCGACGTT TTCATCGAAT TGGGCGAGCG CTCGGCTTTC GCCAACCGCA ACAATGCCGA TCTCTTCATT TCCATCCATT GCAACGCCAC GCCGCGTTCG CGCACGGTGC GGGGAACCGA GACCTTCGTG ATGGGTTTGC ACAAAACCGA GGGTAACCTC GAAGTCGCGA AACGCGAAAA CTCGGTAATC TTGCAGGAAA CCAACTACAA GCAGAAATAC AAGGGCTTCG ACCCCGATTC GCCGCTGGCG CACATTATGC TTGCCAACTA CCAAAGTGCA TTCATTTCCA GCAGCTTGCG GTTCGCCGAT CTCATCGAAA GGAAATTCCA GTCCATTTCG GAACGCGATA GCCGCGGGGT AAAACAGGCC GGGTTCCTCG TGCTGTGGCG CTGTGCCATG CCTAGCGTGC TCATCGAAAC AGGCTTTTTG TCATCACCCG ACGAGGAGGA TTACCTCAGC TCCGATGAAG GCCAGGAGGA GGTCGCCAAA TGCATTCACT CCGCGTTTAT GGCATATAAA AAAGATATGG ACCGGTAG
|
Protein sequence | MLKLLKLVIV ASFLLTSVAF VFQQEPVTTK SGSKVSTVVI DAGHGGKDPG TRGRHTKEKD VALKVALELG RKIKEETPDV KVLYTRSTDV FIELGERSAF ANRNNADLFI SIHCNATPRS RTVRGTETFV MGLHKTEGNL EVAKRENSVI LQETNYKQKY KGFDPDSPLA HIMLANYQSA FISSSLRFAD LIERKFQSIS ERDSRGVKQA GFLVLWRCAM PSVLIETGFL SSPDEEDYLS SDEGQEEVAK CIHSAFMAYK KDMDR
|
| |