Gene Dfer_3579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3579 
Symbol 
ID8227164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4373511 
End bp4374659 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content52% 
IMG OID644931413 
ProductFibronectin type III domain protein 
Protein accessionYP_003087951 
Protein GI255037330 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.623026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.829288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAGT TAACTCATTT ACGCTTCATC ACGGGCCTCG CCCTGCTTCT GCAAGCGTGC 
AATATATTTG CTCCGGTAGA CCCGCTCACA CCGGCGGCTT CGGAGGTGAG TGTGGAGCAG
GTGTGGACGT CGGGCGCGAC GGTGCGGGGG AAAATCGATC AGATAGCCCC TAAAAACGAC
CGTCAGGAAA AGAAAAGCGG CAAAATCCTT GAATATGGAT TTGTTTGGGC TACTCAAAAT
CAGCCAACCC TTGAAGCCGG AATGGTGATC AAGGTAGGTG AAGACAATCC TCCTGCCCCG
TTCGAATTTG TAAGGGATAT CAGCCGCCTC ACCGTGCTGA CGACCTATTA TGTACGCACT
TATGCCCGCA ATGAGGGTGG TGGCGTAGGT TACGGGCCGG TGGCGACATT CAAAACGGAT
GATTATGTGT TTGCAGAACT ATCGGTAGGC AAGATTACGA CAACCTCCAA GGCGTCCGCC
GATATCGTGG TCAATATACT GTCGTTGGGA AATGCGGAAA TATCCTCTTT CGGGGTTTGT
TACTCGTCCG TCAACAACGA GCCTACGACC AAAGACAGCC GGGTTGCGGT CAGTGGGAAA
GCGGCAAAAG GCAGCTTCAC GGCCAATGTC GGCGGGCTAT CTCCCGGCAC GACCTACTTT
GCTCGTGCAT TTGCCGTCAC GCTGGGCGGG ATCATTTACA GCGATGCCAC AACGGCATTT
ACCCTGGGCG AGCCGTCGGT TTTTACCCCA AAAAAATCAT TCATCATGTA TTATTCCAAT
CCTTATGATC TGGATTTGGG AGAGCTGGTG TCGCAAACGG GTTCTGAGGA CTGCAATTGG
TATCCCTACA ACGATAAGCC AGGCATTTAT CCGAAGAACG GAGCAAAGTT CGCGGTTTTA
GGTAAGGTGA ATTTCGATCA GCTCAAATAT ACCGACATAG CGCGATCTAA CCTTTCCGCC
AACTTCATCA ACGGCAGCTA TACCGACGCC AAAGCCAATC AGCTTGAAAA CGGAACGGTA
ATCGCATTCG TCACGAACCA GGGCAGGTAC GGCAAGATGT TGATCGATGC GCACGGGGAG
GACCGCACAC CCGGCACGGC AGGTGGTGGG GATATGGAAG TGACCATTCA AACCTACGAT
AAGCAATAA
 
Protein sequence
MQKLTHLRFI TGLALLLQAC NIFAPVDPLT PAASEVSVEQ VWTSGATVRG KIDQIAPKND 
RQEKKSGKIL EYGFVWATQN QPTLEAGMVI KVGEDNPPAP FEFVRDISRL TVLTTYYVRT
YARNEGGGVG YGPVATFKTD DYVFAELSVG KITTTSKASA DIVVNILSLG NAEISSFGVC
YSSVNNEPTT KDSRVAVSGK AAKGSFTANV GGLSPGTTYF ARAFAVTLGG IIYSDATTAF
TLGEPSVFTP KKSFIMYYSN PYDLDLGELV SQTGSEDCNW YPYNDKPGIY PKNGAKFAVL
GKVNFDQLKY TDIARSNLSA NFINGSYTDA KANQLENGTV IAFVTNQGRY GKMLIDAHGE
DRTPGTAGGG DMEVTIQTYD KQ