Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3540 |
Symbol | |
ID | 8227125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4323863 |
End bp | 4325218 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644931375 |
Product | adenylosuccinate lyase |
Protein accession | YP_003087913 |
Protein GI | 255037292 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0015] Adenylosuccinate lyase |
TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATTAA ATCAGCTTAC GGCGATCTCT CCGGTTGATG GCCGTTATTA CAAACAAGTA TCTGAACTTT CGGCCTATTT CTCGGAATAT GCCCTGATTT ATTACCGGGT GTATGTTGAA ATCGAATATT TCATCGCACT CTGCGAAATC CCCCTCCCGC AACTATCGGA ATTTGACAAG AAAAAATATG CGTCGCTGCG CAAAATCTAT GAGGATTTCA GCGAAGCCGA TGCATTGCAT ATAAAGGACA TTGAAAAGGT GACCAACCAC GATGTGAAGG CCGTAGAATA CTTCATCAAG GAGCAATTCG AGAAGCTGGG CATCGAGTCT TTTCAGGAAT TTATCCACTT TGGACTTACC TCGCAAGACA TCAACAACAC GGCTATCCCG CTGTCGCTGA AAGACGCGAT GGAGCGCCAG ATCAAGCCGC TGTTCCGCCA GGTGCTTTTT GTGTTGAAAC GCATGTCGAT CGAGTGGAAA AACGTGCCGA TGCTCGCATT CACCCACGGG CAGCCCGCAT CACCTACACG CGTAGGAAAG GAGTTCCTGG TTTTTGTGGA ACGATTGGAA CGCCAGCTCG AAATGCTCGA CAAAATCCCG CATTCGGCTA AGTTCGGCGG TGCTACCGGT AACTTCAATG CCCACCATGT CGCTTATCCG AAACAGGACT GGATGGCTTT CGGCCACCAT TTTGTGGAAG GTTTGGGATT AAAAAGAAGC CGCCACACGA CGCAAATTGA GCATTACGAC AATATTGCAG CGATGTTCGA CTGCCTGAAA CGCCTGAACA CGATCCTGAT CGACCTTAAT CGTGATATGT GGACGTACAT TTCAATGGGG TATTTCAAGC AGAAGATCAA AGCCGGCGAA GTAGGATCTT CGGCGATGCC GCACAAAGTG AATCCGATCG ACTTCGAAAA TTCGGAAGGA AACCTGGGGC TGGCATCTGC ATTATTCGAG CATTTTGCCG CGAAATTGCC CATTTCCCGC CTGCAACGCG ACCTTACCGA CTCCACGGTA CTCCGCAACA TCGGCGTCCC CGTCGCGCAT TTGGCTATCG CCCTGAACTC GCTGCTGAAA GGCCTGGGCA AAGTGGAACT GAATGGTGAA GTACTGAAAG CCGAACTGGA AGAAAACTGG GCGGTAGTGT CCGAGGCGAT CCAAACGATC CTGCGCCGCG AAAGCTACCC AAAACCGTAC GAGGCATTGA AAGAGCTGAC CCGCACCAAC GAAAAAATCA CCCACGATTC CATCTCACGT TTCATCGAAA CGCTGGACGT GTCCGAAAAA ATAAGAGAAG AACTCCGCGC CCTGAGCCCG TTCAATTATT TGGGCGTTGT GGAGGATACG TTTTAA
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Protein sequence | MSLNQLTAIS PVDGRYYKQV SELSAYFSEY ALIYYRVYVE IEYFIALCEI PLPQLSEFDK KKYASLRKIY EDFSEADALH IKDIEKVTNH DVKAVEYFIK EQFEKLGIES FQEFIHFGLT SQDINNTAIP LSLKDAMERQ IKPLFRQVLF VLKRMSIEWK NVPMLAFTHG QPASPTRVGK EFLVFVERLE RQLEMLDKIP HSAKFGGATG NFNAHHVAYP KQDWMAFGHH FVEGLGLKRS RHTTQIEHYD NIAAMFDCLK RLNTILIDLN RDMWTYISMG YFKQKIKAGE VGSSAMPHKV NPIDFENSEG NLGLASALFE HFAAKLPISR LQRDLTDSTV LRNIGVPVAH LAIALNSLLK GLGKVELNGE VLKAELEENW AVVSEAIQTI LRRESYPKPY EALKELTRTN EKITHDSISR FIETLDVSEK IREELRALSP FNYLGVVEDT F
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