| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3490 |
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| Symbol | |
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| ID | 8227075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4270577 |
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| End bp | 4271947 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644931327 |
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| Product | UDP-N-acetylmuramoylalanine/D-glutamate ligase |
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| Protein accession | YP_003087865 |
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| Protein GI | 255037244 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTCAACG TTTTTAAATT GATTCTTGTG CAAAAAAAGG TGACGATTCT GGGTGGCGGA
GAAAGTGGCG CAGGGGCCGC TATTCTTGCG AAATCCAAAG GTTTTGAAGT TTTTTTATCG
GATAAGGGCC AATTGCATCA GAAATACGCC GACATTCTGA ACAAAGAAAA TATTCCCTTC
GAACAAGGGC AGCATTCCGA GGAGCGCATC CTCGCAAGCG ACCTCGTGGT GAAGAGCCCG
GGCATTCCCG ATAAAGTGCC CCTGATCGTC GCATTGAAGG AAAAAGGCAT CCTGGTTATC
TCCGAAATCG AGTTCGCCTC TCGCTATACC GACGCGAAAC TCATCGCCAT TACCGGCAGC
AACGGCAAAA CGACCACGAC CTTACTGACT TACCACCTGC TCAAAACCGC CGGCCTGAAC
GTCGGCCTGG CCGGTAACAT AGGCGATAGC TTCGCATGGG CCGTTGCGGA AAAGCAATTT
GAATATTATG TGTTGGAAAT CAGTAGTTTC CAGCTTGATA ACATTATCGA TTTTCACCCA
TACATTTCCC TGCTCCTGAA CATCACCCCC GATCACCTCG ATCGTTATGG TTATGATTTT
CAGAATTATG TGGATTCGAA ATTCAATATC ATCCGCAACC AGCAGGCCAG CGATTATTTC
ATTTATTATA AGGAAAGCGA GGTAATCCAA AAAGAACTGG AAAAGCGCAA TCCGGCGGTC
GGAAGGATCG AAGTTTCGCT CGATAATGCG CTTGAAGCAG GATCTTACCT GGAAAACGGC
ACACTGGTTT CGAAAATCAA TGGGAATGCA CTCGAAATCG CATTCGCCGA GCTGCCGGTC
AAGGGCCCGC ACAATGCCAT CAATGCATTG TCGGCGATTT CGGTAGCGCA GTTGCTAGGC
ATCGATCCGG AGAAGATCCG TGAAGGTTTG AAGTCGTTCA CCAATGCGCC GCACCGTTTG
GAACAGGTAG AAGTGATCGG CGGTGTGACT TACATCAATG ATTCGAAGGC CACCAATGTG
GATTCGGTGT TCTACGCGCT CGGTAGTTTC GACCAGCCGG TGATCCTTAT TGCAGGCGGT
GTGGATAAAG GAAACGATTA TTCACAAATA GAAGCACTTG TTAAAAGTAA AGTGAAGGGG
CTGATCGTTC TTGGAAAAGA TCCCGTGAAA CTGGAAACTT ACTTTGCCGG CAAAGTGCCG
CAAATATATG CGACGGACGA TGTCCGGGAT GCCGTTAACA AAGGGCGTGA ATGGGGCGTG
CCGGGCGATG TCGTGCTGCT TTCCCCAGCT TGCGCAAGTT TTGATTTGTT CAAAAACTAC
GAGGACCGCG GCGATCAGTT CAAAGCAGCC GTCAGAAACC TCACCCAGTA A
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| Protein sequence | MFNVFKLILV QKKVTILGGG ESGAGAAILA KSKGFEVFLS DKGQLHQKYA DILNKENIPF
EQGQHSEERI LASDLVVKSP GIPDKVPLIV ALKEKGILVI SEIEFASRYT DAKLIAITGS
NGKTTTTLLT YHLLKTAGLN VGLAGNIGDS FAWAVAEKQF EYYVLEISSF QLDNIIDFHP
YISLLLNITP DHLDRYGYDF QNYVDSKFNI IRNQQASDYF IYYKESEVIQ KELEKRNPAV
GRIEVSLDNA LEAGSYLENG TLVSKINGNA LEIAFAELPV KGPHNAINAL SAISVAQLLG
IDPEKIREGL KSFTNAPHRL EQVEVIGGVT YINDSKATNV DSVFYALGSF DQPVILIAGG
VDKGNDYSQI EALVKSKVKG LIVLGKDPVK LETYFAGKVP QIYATDDVRD AVNKGREWGV
PGDVVLLSPA CASFDLFKNY EDRGDQFKAA VRNLTQ
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