Gene Dfer_3413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3413 
Symbol 
ID8226992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4170655 
End bp4171422 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content53% 
IMG OID644931244 
ProductMethyltransferase type 12 
Protein accessionYP_003087788 
Protein GI255037167 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACA ACCGGCTCGA ATACCAGCGC ATGTACGAAA CCGAGCGGAA GTTGTGGTGG 
TACAAAATCC TCCACGGCAA GGTTTTGAGC CAGATCCGCA GACATTTCCG GGCCATGGAC
CCGGAGCTGA GCATACTCGA TGCTGCTTGC GGCACCGGTG GGCTGTTGTG GTTTTTGGTT
GAAAATGGTT ATTCCAATGT GCGGGGCTTC GATTATTCGC AGCATGCCAT CGACTTCTCC
AAAGAACGCG GCCTGAATGT GGTCTTCGGC GATCTTCGTG ATGTAGCTGC ATTCGAACCC
GGGCAAACTT TCGACATCAT TACCTGCAAC GACGCGCTGT ATTTTCTGAG CGACGAGGAG
ATCGTCCGCG CATTAGCCGC ATTCAAAGAT CGGTTGAATC GGAATGGATT GATTATCATT
AATATACACG CATTTGAAGC CTTCTCCGGC ACCCACGACC TTGCCGTTGG AAGCTCTCGC
AGGTTCAGGT TAGCGCAGTT TGAGGCCTAT TCCAAAGCGG CGGGGTTGAA GATCGGGTAC
AATACTTACT GGCCATTTGC GCTTTCGCTG CCCATTCTGC TCGTGCGGCA ATGGCAAAAC
TACCGTATCC GCAATAAAAA GATCAATGTG GAGGAGCTCG ATTCGGACGT TGAATATCCG
GGCGACGCCA TCAATACCGT ATTAAAGGCC GTTACCCAGG CCGAATCCGC CATCCTGGGC
AAAGCACCAT TCGGCAGCTC GCTTTTCATG ACCCTGCGAC AAGCCTGA
 
Protein sequence
MIDNRLEYQR MYETERKLWW YKILHGKVLS QIRRHFRAMD PELSILDAAC GTGGLLWFLV 
ENGYSNVRGF DYSQHAIDFS KERGLNVVFG DLRDVAAFEP GQTFDIITCN DALYFLSDEE
IVRALAAFKD RLNRNGLIII NIHAFEAFSG THDLAVGSSR RFRLAQFEAY SKAAGLKIGY
NTYWPFALSL PILLVRQWQN YRIRNKKINV EELDSDVEYP GDAINTVLKA VTQAESAILG
KAPFGSSLFM TLRQA