Gene Dfer_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3400 
Symbol 
ID8226979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4157431 
End bp4158705 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content56% 
IMG OID644931231 
ProductGlu/Leu/Phe/Val dehydrogenase 
Protein accessionYP_003087775 
Protein GI255037154 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTACA TAGAACCGGC TCCGATTAAG GATAAAGACA ATCCGTTGGA GTCAATGATG 
CAGCGATTCG ACAAGGCGGT AGACCTGCTC GGCATTTCGG AAGAAATGTA TTATATCCTC
AAAGTGCCCC GCAAACAAGT CACGGTGGGC CTGCCGGTAA CGATGGATTC CGGCGAAATC
CGCACCTTCG AAGGTTATCG TGTGATCCAT TCCACCATCC TCGGCCCCAG CAAAGGCGGC
ATTCGTTTTG ACCCCGATGT AAACCTCGAT GAAGTGCGCG CATTGGCCGC GTGGATGACC
TGGAAATGTG CCGTGGTGGA CATTCCCTAC GGCGGCGCCA AAGGCGGTGT AGCCTGCAAC
CCACGTGAAA TGTCGGCCGG CGAGATCGAA CGTCTCATGC GCGCGTACAC GACGGCATTA
CTCGACGTGT TTGGCCCCGA CCAGGACATT CCCGCACCCG ATATGGGCAC CGGTCCGCGC
GAGATGGCGT GGCTCATGGA TGAGTATTCC AAATCGAAAG GAATGACGGT ACCCGCCGTG
GTGACCGGCA AACCGCTGGT CCTCGGCGGC TCATTGGGCC GTACGGAAGC AACCGGCCGC
GGCGTAATGG TATCCGCATT GGCTGGTATG GAAAAGCTCC GCATCAATCC TTACCGTGCT
ACGGCGGCGG TGCAGGGCTT TGGTAATGTT GGCTCGCACG CAGCGCTGCT CCTGCGCGAG
CGCGGCACGG CCATCCACGC GATCAGCGAC ATTTCAGGGG CATATTATAA TGATAAGGGC
ATCGACATTG CGGATGCCAT TGCTTACCGT GATGCCAACA AGGGTTCATT GGAAGGTTAT
GCCAAAGCGG AGCTCATTTC CGGCGACGAC CTGTTCACAT TACCTGTGGA CGTACTCGTG
CCCGCAGCGA AAGAGGACGT AATCACCCGC AAGAACGTGG CGGGCATCCA GGCTCGGATG
ATCGTAGAAG GCGCCAACGG CCCCACATCC GCCAAAGCCG ACGACATTAT CAATGACAAA
GGCATAATGG TCGTCCCCGA CATCCTCGCC AATGCCGGCG GCGTAACGGT ATCCTATTTC
GAATGGGTGC AAAACCGCAT CGGCTACAAA TGGACACTCG AACGCATCAA CCGCCGCACC
GACCGCATTA TGAAAGATTC CTTCGACAAG GTGTATGAAA CGTCCCTGAA ATACAAGGTA
TCACTGCGCA TTGCGGCGTA CATCGTGGCG ATTGACAAGG TGGCGAGTAC ATATAAGTAC
CGTGGAGGGT TTTAA
 
Protein sequence
MSYIEPAPIK DKDNPLESMM QRFDKAVDLL GISEEMYYIL KVPRKQVTVG LPVTMDSGEI 
RTFEGYRVIH STILGPSKGG IRFDPDVNLD EVRALAAWMT WKCAVVDIPY GGAKGGVACN
PREMSAGEIE RLMRAYTTAL LDVFGPDQDI PAPDMGTGPR EMAWLMDEYS KSKGMTVPAV
VTGKPLVLGG SLGRTEATGR GVMVSALAGM EKLRINPYRA TAAVQGFGNV GSHAALLLRE
RGTAIHAISD ISGAYYNDKG IDIADAIAYR DANKGSLEGY AKAELISGDD LFTLPVDVLV
PAAKEDVITR KNVAGIQARM IVEGANGPTS AKADDIINDK GIMVVPDILA NAGGVTVSYF
EWVQNRIGYK WTLERINRRT DRIMKDSFDK VYETSLKYKV SLRIAAYIVA IDKVASTYKY
RGGF