| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3370 |
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| Symbol | |
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| ID | 8226949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4124622 |
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| End bp | 4126646 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644931201 |
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| Product | DNA primase |
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| Protein accession | YP_003087745 |
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| Protein GI | 255037124 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATTA ATCCCGAAAC CGTCGAAAGA ATCAAGCACG CCGCAGATAT TGTGGAGGTC
GTAGGGGATT TTGTGTCATT GAAGAAGAAA GGTGCTAACT ATTCGGCCTG CTGCCCTTTT
CACAATGAAA AAACGCCGTC GTTCAACGTC AACCCCGTAA GGCAGATCTA CAAGTGCTTT
GGCTGCGGCG CGGCGGGCGA TTCCATCAAG TTTGTGATGG ACATCGATGG CATCGGCTAC
GGCGAGGCGC TGCGGTATCT GGCCGGCAAG TATAATATTG AAGTCGAGGA GGAAGAGCTT
ACCGACGAGG AAACACTCCG GCAGAATGCG CGGGAAAGCT TGTACATCAT CCTCAATTTT
GCCAAAAATT ACTACCAACA CCAGCTTCAC CATAGCGATG AAGGCCAGGC GATCGGTCTG
AGCTATTTCC GTGAGCGTGG TTTTACGAGT GAAATCAGGA AAAAATTCGA GCTCGGTTAC
AGTCTCGACA ACTGGGATTC CTTTTCAAAA GAAGCATTGG AAAAGGGCTA TTCCGCTGAA
ATCCTCGAAA GGGCGGGATT GCTCATTCAC AAGGAAGGCA GCCACACGGC CGGCTACGAC
CGTTTCCGCG GGCGGGTTAT TTTCCCGATC CATAATATAG CCGGGAAAAC GATCGCATTC
GGCGCCCGGA TTTTAAAAAC CGACAAGAAC CAGCCCAAAT ACCTCAACTC TCCCGAAACG
GAGGTTTACC ATAAAAGTGA GGTCCTTTAC GGCATTTACC AAGCCAAAAA CGCGATCCGC
CAACTTGAAC ATTGCTACCT CGTCGAAGGC TATACCGATG TGATTTCACT GCACCAGGCG
GGCATTGAAA ACGTGGTCGC GTCTTCGGGA ACGTCGCTGA CGGTCGAGCA GATCAGGCTT
ATCGGCCGGT TTACGCCCAA TATCACGATT CTTTATGACG GTGATATGGC GGGGATCAAG
GCGGCGCTGC GCGGTCTGGA TCTGGTGCTG GAAGAAGGTT TGAATGTAAA TGTCGTCCTT
TTCCCTGATA ACGAAGACCC CGACAGCTAT GTCCGCAGAG TGGGTGCGGA GGCTTTTAAG
GCACACCTCA AAAGTGCGTC GAAGGACTTT ATCACTTTCA AAACGGAAAT CCTGTTGCAG
GATGCCGGCA ACGACCCATT CAAGCTGGCG GCTGTGATTC AGGAGGTTGT GAACAGCATT
GTAAAGATTC CCGATGCTAT CAAACGGCAG GTGTTTTTCC ACCGGACGTC GGAAATGATG
CGGGTGGATG AGCAGATGCT GATCACGGAG GGCAATAAAC TACTCCGAAA ACAGCATTCG
GCCAAACCGG CGGAGAGGCC GCGGCAGTCA AATGCGGGGG GCCAGGGTTC TGCCGGGACA
AGAGGGCCCG AATTTGATGG GCCGCCGGAT CTGGATGCAT TGTTCAGCGA CGGTTTCGGA
CCATTCGGCG GTGAGCCGGA TGATAACCCA TTCGTGCCGA CCGAACACGC GCCGGAAGCG
TTCCAGCGTA CCAAGCTGCA TTACCAGGAA GAAGCCTTTG TGCGCCTGCT CGTGGTGCAC
GGCGCGCGTG AGCTGGAGCC AACCATTACC GTTTGCCAGT ATGTATTGGG CCAAATTGAA
GGAATTGAGC TGAAAGATCC CGTTTACAGC CATTTACTGA ACTTGTTCCG CGAGAATTTT
GGCAAAAACA ATGTCCTCAC AACCGACTAT TTCCTGCAAC ATCACGAAGC GGAAATCAGG
AACCTGACGA TCGAATGGCT GACGCAGAAG CACGAATTGA GCGAGTTATG GAAGGAGAAA
TACGAGATTT ATGTACCTTT TGAAACCGAT GTACTCGACA GGACCGCCTT CAACAACATT
TTGAGGCTCA AAAAGGCATT TGTAGAAGAA AAAATGAAGA CCTGCATCCA AAACATGGCC
CAGGCCAAAA CCGGCGAAGA GCAGGATGCC ATCATGAATG AATACCAATT CTATAAAGGA
ATCAGCATGG CCGCCGCCAA GGAATTGGGA AGCGTAATCG GATAA
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| Protein sequence | MRINPETVER IKHAADIVEV VGDFVSLKKK GANYSACCPF HNEKTPSFNV NPVRQIYKCF
GCGAAGDSIK FVMDIDGIGY GEALRYLAGK YNIEVEEEEL TDEETLRQNA RESLYIILNF
AKNYYQHQLH HSDEGQAIGL SYFRERGFTS EIRKKFELGY SLDNWDSFSK EALEKGYSAE
ILERAGLLIH KEGSHTAGYD RFRGRVIFPI HNIAGKTIAF GARILKTDKN QPKYLNSPET
EVYHKSEVLY GIYQAKNAIR QLEHCYLVEG YTDVISLHQA GIENVVASSG TSLTVEQIRL
IGRFTPNITI LYDGDMAGIK AALRGLDLVL EEGLNVNVVL FPDNEDPDSY VRRVGAEAFK
AHLKSASKDF ITFKTEILLQ DAGNDPFKLA AVIQEVVNSI VKIPDAIKRQ VFFHRTSEMM
RVDEQMLITE GNKLLRKQHS AKPAERPRQS NAGGQGSAGT RGPEFDGPPD LDALFSDGFG
PFGGEPDDNP FVPTEHAPEA FQRTKLHYQE EAFVRLLVVH GARELEPTIT VCQYVLGQIE
GIELKDPVYS HLLNLFRENF GKNNVLTTDY FLQHHEAEIR NLTIEWLTQK HELSELWKEK
YEIYVPFETD VLDRTAFNNI LRLKKAFVEE KMKTCIQNMA QAKTGEEQDA IMNEYQFYKG
ISMAAAKELG SVIG
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