Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3325 |
Symbol | |
ID | 8226903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 4070678 |
End bp | 4072681 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644931156 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_003087701 |
Protein GI | 255037080 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCCTC TTTCCATTCT GCTTGTTGAA GACGACGACA TCGACGCTAT CAAACTGAGC CGTGCAATCA GCAGGGCGCA AGTTGAAATA GGGGAGATCC GAGTATGCAA ATATGCCGAA GAAGCGCTCC GGATGCTGGA AACGTGGACG CCTGGCTGCA TTTTTCTGGA CTACCAGCTG CCTAAAACCA ACGGTTTGGA ACTGCTCAAA ACCGTGAAAC TCCGCGCGCC CCACCTGCCC GTGATCGTGC TAACCTCGCA TGGCGACGAG CGCATTGCCG TCGAGATGAT GAAAGCCGGG GCGCTGGATT ACTTTCCAAA ATCGGAAGTG AACCCCGAAA AACTCACGAA GGCCTTCCAC ACCATGAGCC AGATGCTCGA AATGGAAAAA GGCCGGGAAG TAGCGGAGCA CGAATTGGCT GAGAAAGAGG AATTTATTAA TAAAATCGCG CTCCTTTCGC CCAATATCAT TTATGTGATT GATATTGAAA AATGGACCAA TATTTTCCAC AACAAGCAAA TCTGGAAAAT ACTCGGCTAC TCGGAACACG AGGTAGAAAC CGACACCCGC AAGGGCCTTG CGCGGATTAT CAACGAGCGC GACCAGCATA CTTTCCGCGC GCATTACAAC CACATGCGCT ACAGTGTGAA AGATGCGGAA GTGGTTGAAA AGGAATTCAG GTTGAAACAC AAAAACGGCT CGGAAATCTG GATTATCACC CGTGAAGTGC CTTTCAAAAG GAACGCGCGC GGGCGTGTGC AGGAAGTGCT GGGCACGGCC ATCGACATTA CGGCCCGCAA AATCGCCGAA AAGGAGCTCA TTCAGGCGAA AAAAGATGCC GAAGAGGCTA CCCGCATCAA ATCCGACTTC CTATCGACGA TGAGCCACGA GATCCGGACG CCGATGAATG CGATCATCGG ATTCACCGAC CTGCTCCTAT CGAGCGGGTT TACCGGACAG GAGCAGCAGT ATTTGAACAC CATTAAATAT TCCGCTGATA ATCTGCTGGT TATCCTGAAC GACATCCTCG ATTTTTCGAA GATCGAAGCG GGAAAATTCG GTCTGGAAAA CTTCGAATTC GACCTGCGCG AGAAGTTGGG ATACCTCATG AAAACGTTCG AAATCCGTGC GAAGGAGAAG TCGATCCAAT TCACTTTCCA ATGCAGCACC GACGTTCCGC AGATCGTCAT GGGCGACCCT TACCGGCTGA ACCAAATCAT GGTCAACCTG ATCGGCAACG CCATCAAATT CACCGAAGAA GGCGGTTCTG TGGAAGTATC CGTGCACCTC GATAAAGATC ACGGCGACAG CATCGACCTG AAAATCGACG TGTCCGATTC AGGAATCGGC ATTTCGGAAG ACAAGCTGAG CGTGATTTTC GACAGCTTTT CCCAAGCGCA CAACAACAAT GCCGTCCGCA ACTTCGGCGG CACGGGGCTG GGGCTAAGCA TAACCCGCAA GATCACCGAG CTCATGAATG GCTCCATTTC GGCCCGCAGC ACGCTGGGCA AGGGAAGCAC ATTCACGGTG GTCCTCAATT TCGGCAAGGG AAGCACGTCC TATGAAGAAG AAAAAACCAA TGCGCCGACG AAACTGTCTT TAAAAGGCTA TCGCATTCTG GCCGCCGAGG ACATTTTCGC GAACCAGATC CTGCTGAAAC ACCTGCTGGA AAAATGGGAA GCCGAGTTTG TGATTTGCAA CAACGGAAAA GAGGTGCTGC ACATGCTCGA AACGGAAGAT TACGACCTGA TCCTGATGGA CATCCAAATG CCGGTCATGG ACGGCGTAAC GGCCATGAAG AAGATCCAAA GCTCCTATCC GCGCCATCAC CACGTCCCGG TAATCGCGCT CACCGCCGAT ACCTTCGCGG AAAAAACACC CGAAATCGCC GCCTGCAATT TCAGCGGGTT TGTGACGAAA CCGTTTAAAG CGGAAGAGCT GATCAGGGCA ATTAATAAGC ATCTGAAAGT AAAGGTCCCG CCGAATCATG CGGTGATTGG GTAA
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Protein sequence | MPPLSILLVE DDDIDAIKLS RAISRAQVEI GEIRVCKYAE EALRMLETWT PGCIFLDYQL PKTNGLELLK TVKLRAPHLP VIVLTSHGDE RIAVEMMKAG ALDYFPKSEV NPEKLTKAFH TMSQMLEMEK GREVAEHELA EKEEFINKIA LLSPNIIYVI DIEKWTNIFH NKQIWKILGY SEHEVETDTR KGLARIINER DQHTFRAHYN HMRYSVKDAE VVEKEFRLKH KNGSEIWIIT REVPFKRNAR GRVQEVLGTA IDITARKIAE KELIQAKKDA EEATRIKSDF LSTMSHEIRT PMNAIIGFTD LLLSSGFTGQ EQQYLNTIKY SADNLLVILN DILDFSKIEA GKFGLENFEF DLREKLGYLM KTFEIRAKEK SIQFTFQCST DVPQIVMGDP YRLNQIMVNL IGNAIKFTEE GGSVEVSVHL DKDHGDSIDL KIDVSDSGIG ISEDKLSVIF DSFSQAHNNN AVRNFGGTGL GLSITRKITE LMNGSISARS TLGKGSTFTV VLNFGKGSTS YEEEKTNAPT KLSLKGYRIL AAEDIFANQI LLKHLLEKWE AEFVICNNGK EVLHMLETED YDLILMDIQM PVMDGVTAMK KIQSSYPRHH HVPVIALTAD TFAEKTPEIA ACNFSGFVTK PFKAEELIRA INKHLKVKVP PNHAVIG
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