Gene Dfer_3313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3313 
Symbol 
ID8226891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4057168 
End bp4058481 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content54% 
IMG OID644931144 
ProductFAD linked oxidase domain protein 
Protein accessionYP_003087689 
Protein GI255037068 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCTC CGTTACTTTC CCCGCTCGCA GGCTGGGCCC AGGCCGATAA GCTCCGCAAC 
TGGGCAGGCA ACCTTGAATA CAGCACCGAT AGGCTGGATC TGGGCAAAAA TTTGAAGCAG
GTACAAACGA TCGTCAAGAA ATACCCGAAG CTGAAAGTAC TCGGAACGCG GCATTGCTTC
AACGATATTG CGGATACGAA AGACCAGTTT ATTTCCGTAG TCGGTGCGGA GGAGGTGATG
GATTTGGATA CCAAAAATAA AACCGTGACC GTGAACGCAG GGCTCAAATA CGGCCAGCTG
GCGCCTTACC TGCATGAACA AGGCTTCGCG CTGCCTAACC TCGCCTCGCT GCCGCACATC
TCCGTTGCGG GCGCCTGTGC AACGGCCACG CACGGGTCCG GCGAAAAAAA CGGCAACCTG
GCTACCGCAG TTTCTGCATT TGAAATGGTG ACGGCCGACG GGGAAGTGTT GAAGTTGAGC
AGGGAAAAAG ACGGAGAGAA ATTCAATGCG GCGGTGGTGC ATCTGGGCGC TTTGGGCGTG
GTGACAAAAG TGACGCTGGA CGTGCAGCCG ACGTTTATGA TGGGCCAATA TGTGTATGAA
AATGTGCCAT TGAGCCAGCT GAAAGCACAT TTCGATGAGA TAGAGGCCAG CGGTTACAGC
GTGAGTTTGT TTACCAACTG GGCCGCCGAT GACATTACCG AGGTGTGGGT TAAATTTAAA
ACCAATAGTG CCAAGCCGTT GAAAGCGCTG CCCGACAAGG AATTTTTCGG CGGGAAGCTC
GCTACCAAAA ACCTGCACCC GATCCCTGAG CTCTCGGCCG AAAACTGCAC CGAGCAGATG
GGCGTGCCGG GGCCTTGGTA CGAGCGGATG CCGCATTTCA AAATGGGTTT TACGCCCAGC
AGCGGCAAAG AGCTGCAATC GGAGTATTTT GTTCCGAGAA AAAACGCGGT GGACGCGATC
CTGGCAATTT CCAGAATGGG TAAACAAATC AGCCCGCATT TGTTTACATC CGAAATCAGG
ACCATTGCGG CCGATAACCT TTGGCTGAGC CCGTGTTACA AGCAGGATTC AGTGGCGATC
CACTTTACCT GGAAGCAGGA CTGGCCGGCG GTGAGCAAGT TGCTGCCGGT GATCGAGCGG
GAGCTGGCGC CATTCAATCC GAGGCCGCAT TGGGGCAAGC TGTTCACGGT GTCGCCCGCG
GTGCTGGAAA AGCGGTACGA AAAGCTGCCG GAATTCCGCG AACTGGCCGG GCAAATGGAC
CCGAAAGGGA AGTTTCGGAA TGCATTTCTG AATTTGAATG TGTTTAAGGC ATAG
 
Protein sequence
MTAPLLSPLA GWAQADKLRN WAGNLEYSTD RLDLGKNLKQ VQTIVKKYPK LKVLGTRHCF 
NDIADTKDQF ISVVGAEEVM DLDTKNKTVT VNAGLKYGQL APYLHEQGFA LPNLASLPHI
SVAGACATAT HGSGEKNGNL ATAVSAFEMV TADGEVLKLS REKDGEKFNA AVVHLGALGV
VTKVTLDVQP TFMMGQYVYE NVPLSQLKAH FDEIEASGYS VSLFTNWAAD DITEVWVKFK
TNSAKPLKAL PDKEFFGGKL ATKNLHPIPE LSAENCTEQM GVPGPWYERM PHFKMGFTPS
SGKELQSEYF VPRKNAVDAI LAISRMGKQI SPHLFTSEIR TIAADNLWLS PCYKQDSVAI
HFTWKQDWPA VSKLLPVIER ELAPFNPRPH WGKLFTVSPA VLEKRYEKLP EFRELAGQMD
PKGKFRNAFL NLNVFKA