Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3274 |
Symbol | |
ID | 8226852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 4012987 |
End bp | 4013889 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644931106 |
Product | alpha-L-glutamate ligase, RimK family |
Protein accession | YP_003087651 |
Protein GI | 255037030 |
COG category | [H] Coenzyme transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCG CCGTATTATC CACCAATCCG GACCTGTATT CGACCAGGCG CCTGGTGGAG GCTATCAATC AAAAGGGACA CGAAGCGGTT GTGATCGATC ATGTCAAATG CTCCGTCATG ATCGAAGGCG GCAAGCCCAC CATTTTTTAC AAAGGCAAGT CCGTCGCCGG CATCGACGCC GCCATTCCGC GGATCGGCAC GTCGGTGAAT GCATTTGGCT GCGCGGTCGT GCGGCAGTTG GAGCTGATGA AGGTTTTCAC GACCGTCAAG TCGCAGGCTA TTCTACGCTC GCGCGACAAG CTGCGCAGCA TGCAGGTGCT CGCGAAGGCC GGTATCGACA TTCCAAAAAC CGTCATCGCC AAAAACCCAG CGCAGGTCAA CGAGCTCATT CACCTCGTAG GTGGCCCGCC GGTGGTGATC AAGCTGCTCG AAGGCACGCA GGGCGTGGGC GTCGTTCTGG CCGAAACCAT TAAAGCCGCC AAATCGACCA TTGAGGCATT TTACGGGCTA AAAGCCAACT TCCTCATCCA GGAATACATT GCCGAATCCA AAGGCGCCGA CATCCGCGCA TTCGTGATCG GGAACAAGGT GATAGCCGCT ATGAAACGCC AGGGCGCCGA GGGCGATTTC CGCTCCAACC TTCACCGCGG CGGCTCCGGG TGTATGATTG ATCTTTCTCC CGAAGAAGAG CAAACAGCCA TAGCGGCCGC CAAGGCACTG GGCGTCAAAA TCGCGGGGGT GGATATGCTG CAATCGGCAC GCGGACCGCT GGTAATGGAG GTCAATTCCT CACCAGGGCT GAGAGGCATT GAGGAGGTGA GCGGCCTTGA CATTGCGTCG ATGATCGTGG CCTATATTGA GGATAAAATC GTTACCGATG AAGGGGATAC GGTGGGGGTT TGA
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Protein sequence | MKIAVLSTNP DLYSTRRLVE AINQKGHEAV VIDHVKCSVM IEGGKPTIFY KGKSVAGIDA AIPRIGTSVN AFGCAVVRQL ELMKVFTTVK SQAILRSRDK LRSMQVLAKA GIDIPKTVIA KNPAQVNELI HLVGGPPVVI KLLEGTQGVG VVLAETIKAA KSTIEAFYGL KANFLIQEYI AESKGADIRA FVIGNKVIAA MKRQGAEGDF RSNLHRGGSG CMIDLSPEEE QTAIAAAKAL GVKIAGVDML QSARGPLVME VNSSPGLRGI EEVSGLDIAS MIVAYIEDKI VTDEGDTVGV
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