| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3267 |
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| Symbol | |
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| ID | 8226845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4005818 |
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| End bp | 4008262 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644931099 |
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| Product | ribonucleoside-diphosphate reductase, alpha subunit |
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| Protein accession | YP_003087644 |
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| Protein GI | 255037023 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGTCA TAAAGCGTGA CGGCCGCCGC GAATCCGTGA AATTCGACAA GGTGACCGCC
CGTATCGAGA AATTGAGCTA CGGGCTCGAC GCCACGTACG TCCAACCCGT GGAAGTAGCC
AAGAAGGTTG TTTCCGGTAT TTACGACGGC GTTACTACCG CCGAGCTGGA TAACCTCGCT
GCCGAAACCG CAGCTTCCAT GACCACCAAG CACCCGGACT ATGCGATCCT GGCTGCCCGC
GTCGCTATCT CGAACCTTCA TAAGAACACA TTGAAGTCGT TTTCGGCTAC GATGAAGCGT
CTTTATACAT ATATAGATTC CAAAACCGGC GAGAATGCGT CGTTGATCTC CCGCGAGGTT
TACGAGGTAA TCCGCCAGAA TGCATCGCTG CTCGACTCTA CTATTATATA TGACCGCGAC
TATTCCTACG ATTATTTCGG CTATAAAACC CTCGAAAAGT CGTATTTACT GAAAGTTGAG
GGAAAAATTG TCGAGCGTCC GCAGCATATG CTCATGCGCG TGGCGATCGG AATTCACCAG
GAGGACGTGC AGGCGGCGAT TGAAACCTAC CATTTGCTTT CGGAAAAATG GTTTACGCAT
GCGACGCCTA CGCTGTTCAA TGCAGGTACC CCGAAGCCGC AAATGTCGTC GTGCTTCCTG
CTCACGATGA AGGAGGACAG CATCAATGGT ATTTATGATA CCCTTAAAAA CTGCGCATTG
ATTTCGCAGT CGGCCGGTGG TATCGGTTTG AGCATTCACG ACGTCCGCGC GACGGGTACA
TATATTAAAG GTACGAATGG ACAATCAAAC GGTATCGTTC CGATGCTCCG CGTGTTCAAC
GACACGGCGC GATACGTGGA TCAGGGAGGC GGCAAGCGCA AAGGTTCTTT TGCTATATAT
ATAGAACCCT GGCATTCGGA CATCTTCGAT TTCCTCGATC TGAAAAAGAA CCACGGAAAA
GAAGAGCAGC GTGCACGCGA CCTTTTCTAT GCGTTGTGGA TTCCGGATCT GTTCATGAAG
CGCGTGGAAG CGAACGATAC CTGGTCGCTC TTCTGCCCGC ACGAATGTCC GGGACTGGCC
GATACGCACA GCGAGGAGTT CGAAAAACTG TACGAACAAT ACGAACGCGA AGGCCGCGCA
CGCAAGACCA TCAAGGCGCA AGATCTGTGG TTCGCGATCA TGGAATCGCA GATCGAGACG
GGTACTCCTT ATATGTTGTA CAAGGACCAT GCGAACAGCA AGTCCAACCA GCAGAACCTG
GGTACCATTA AGTCTTCCAA CCTTTGTACC GAGATCATCG AGTACACGGC TCCCGACGAG
GTGGCGGTTT GTAACCTAGC TTCTATCGCA TTGCCGAAAT TCGTAGAGCA AGGTGCGGAT
GGCTTCATGC ATTTCGATCA CCAGAAGTTG TACGAAATCA CGAAAGTGGT TACGCGTAAC
CTGAATAAGA TCATCGATCT GAACTTCTAT CCGGTTCCCG AAGCAGAGAA GAGCAACAAA
CGCCACCGTC CGATCGGTAT CGGGGTGCAG GGTCTGGCCG ATGCATTCTG TATGATGCGC
ATGCCGTTCG ACTCCGACGA GGCGCGTCGG TTGAACAAAG ACATTTTCGA AACGATCTAT
TACGGGTCCA TGGAAGCTTC GATGGAGCTG GCGATGCAGA ACGGCCCGTA CGAAACCTGG
GCAGGCAGCC CGATCTCGCA AGGGGTATTC CAATTTGATA TGTGGAATGT AACGCCGGAA
AGCAAGCGCT GGAACTGGGA GAAACTGCGG AAAGAAGTGG TACAAAACGG TGTGCGCAAC
TCGTTGCTGC TTGCCCCGAT GCCGACCGCC TCTACGAGCC AGATACTCGG TAACAACGAA
TGCTTCGAGC CATTCACATC CAATATATAT GTAAGAAGGG TGTTGTCGGG TGAATTTGTG
GTGGTGAATA AATACCTGCT CAAAGATCTG GTAAGACTTG GCTTGTGGAG CGAGGAGATG
AAAAACAACC TCGTTCGTGC CAGCGGATCG GTACAAGCGA TTCCGAATAT CCCGCAAAAC
ATCAAGGATC TCTATAAAAC GGCATGGGAG ATTAAACAGC GCAGCCTGCT CGATATGTCG
GCCGACCGGG GTGCTTACAT TTGCCAGTCG CAGTCGTTGA ACATCTTCAT GGAGGAGGCG
AACTTCGGCA AGCTGACATC GATGCACTTC TATGCATGGA AAAAGGGCCT CAAAACCGGC
ATGTACTACC TGCGTACCCG CGCGGCGTCC GATCCGGTGC AGTTCACCGT CAGCAAGCAA
GCGGAGCCGC AACTGGAACC CGCAACTGCC GTGGTGGCCG AAAAGGAGCT CAACTACGTG
CAATACGCGG AGGAGCACGC TAAGCCGGCT GCGCCGCGTG ATAATCGCTC CGACATGCAA
TGTTCCCTCG ACGATCCGGA AGGATGCGAG GCTTGTGGAT CGTAA
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| Protein sequence | MYVIKRDGRR ESVKFDKVTA RIEKLSYGLD ATYVQPVEVA KKVVSGIYDG VTTAELDNLA
AETAASMTTK HPDYAILAAR VAISNLHKNT LKSFSATMKR LYTYIDSKTG ENASLISREV
YEVIRQNASL LDSTIIYDRD YSYDYFGYKT LEKSYLLKVE GKIVERPQHM LMRVAIGIHQ
EDVQAAIETY HLLSEKWFTH ATPTLFNAGT PKPQMSSCFL LTMKEDSING IYDTLKNCAL
ISQSAGGIGL SIHDVRATGT YIKGTNGQSN GIVPMLRVFN DTARYVDQGG GKRKGSFAIY
IEPWHSDIFD FLDLKKNHGK EEQRARDLFY ALWIPDLFMK RVEANDTWSL FCPHECPGLA
DTHSEEFEKL YEQYEREGRA RKTIKAQDLW FAIMESQIET GTPYMLYKDH ANSKSNQQNL
GTIKSSNLCT EIIEYTAPDE VAVCNLASIA LPKFVEQGAD GFMHFDHQKL YEITKVVTRN
LNKIIDLNFY PVPEAEKSNK RHRPIGIGVQ GLADAFCMMR MPFDSDEARR LNKDIFETIY
YGSMEASMEL AMQNGPYETW AGSPISQGVF QFDMWNVTPE SKRWNWEKLR KEVVQNGVRN
SLLLAPMPTA STSQILGNNE CFEPFTSNIY VRRVLSGEFV VVNKYLLKDL VRLGLWSEEM
KNNLVRASGS VQAIPNIPQN IKDLYKTAWE IKQRSLLDMS ADRGAYICQS QSLNIFMEEA
NFGKLTSMHF YAWKKGLKTG MYYLRTRAAS DPVQFTVSKQ AEPQLEPATA VVAEKELNYV
QYAEEHAKPA APRDNRSDMQ CSLDDPEGCE ACGS
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