Gene Dfer_3242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3242 
Symbol 
ID8226817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3975795 
End bp3977027 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content55% 
IMG OID644931071 
Productoxidoreductase molybdopterin binding 
Protein accessionYP_003087619 
Protein GI255036998 
COG category[R] General function prediction only 
COG ID[COG2041] Sulfite oxidase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.842559 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCCG AATTAAACAG AAGAGATTTT CTCAAACAGG GCAGCCTCAC CGCGCTGGTT 
ACCGCAATGG GTAGCCAGAT CGTTTTCGCA CACCACATGC CACCTGGCTA CCGGCCTATT
TTTCTGGATG AAAAGGACGC ATTGAAAGGC AAAAGCACGG AAATGATCGT GCAGGGCGAC
AAACCGTGGA ATGTGGAAAC GCCGGTGCAT TTGCTCGACG ACCGCGTCAC GCCCGTCGAC
AAAATGTTTA TCCGCAACAA CGGCCTCGTT CCCGAGAAAA TAGATGTGGC GAACTGGACG
CTCACGATTG ACGGAGAGTC GGTAAAAGCG CCGAAAACCT ACTCGCTGGC CGACCTCAAA
AAGAAATTCA AACAACATAC TTACCAGCTC GTGCTGGAAT GCGGCGGCAA CGGTCGCGCC
GGTTACCAGC CGCAGGCATC GGGCAACCAG TGGGGCCAGG GCGCGGTGCA TTGTGCGCAA
TGGACGGGCG TGCGGTTGAA AGATGTATTG AATGATGTGG GCATTAAAAA CGATGCCGTT
TACATTGGAT ACCACGGCAA AGACCTGCAC CTGAGCCGCG ACCCGAAAAA AGAGTCGATC
TCGCGCGGCG TGCCTATGTC GAAAGCGATG GAAGACGAGA CATTGATCGC CTGGCAAATG
AACGGCCAGG ACATCCCCGA GTTCCACGGC TACCCGCTCC GGCTGGTGAT CGGAGGCTGG
CCGGCTTCGG TGTCGGGCAA ATGGCTTAGC CGCATTTCTG TACGCAATAA AGTACACGAT
GGCGCTAAAA TGGAAGGCCA TAGCTACAAA CTACCGCGCA ACCCGGTGGT GCCCGGCACG
GACATTCCGG CTACGGATGA GTATTACAAA ATCATCGAAT CCATGCCGGT GAAATCGCTC
ATTACCTATC CCAAAACGGG CGCGATGCTC GATCCGGGGA AGCAGCTTGC CTTGCGCGGG
CACGCGTGGG CCGGCGACCA TGCCGTGAAA AAAGTGGAAG TTTCCATTGA CTTCGGCGCT
ACCTGGAAAG AATGCAAGCT CGAAGCACCC GTGAACCGGC TGGCGTGGCA GCATTGGAAT
ACCAACATTC AGTTTCCTGC CAACGGATAC TACGAAATAT GGGCGAAAGC GACCGACGAC
AAGGGCAATG CACAACCCAT GCTGGTGCCG GGCTGGAATC CGGGCGGGTA TCTCAACAAT
GCCTGCGAGC GCATCGCGGT GAAGGTAGGA TAA
 
Protein sequence
MNSELNRRDF LKQGSLTALV TAMGSQIVFA HHMPPGYRPI FLDEKDALKG KSTEMIVQGD 
KPWNVETPVH LLDDRVTPVD KMFIRNNGLV PEKIDVANWT LTIDGESVKA PKTYSLADLK
KKFKQHTYQL VLECGGNGRA GYQPQASGNQ WGQGAVHCAQ WTGVRLKDVL NDVGIKNDAV
YIGYHGKDLH LSRDPKKESI SRGVPMSKAM EDETLIAWQM NGQDIPEFHG YPLRLVIGGW
PASVSGKWLS RISVRNKVHD GAKMEGHSYK LPRNPVVPGT DIPATDEYYK IIESMPVKSL
ITYPKTGAML DPGKQLALRG HAWAGDHAVK KVEVSIDFGA TWKECKLEAP VNRLAWQHWN
TNIQFPANGY YEIWAKATDD KGNAQPMLVP GWNPGGYLNN ACERIAVKVG