| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3231 |
|---|
| Symbol | |
|---|
| ID | 8226806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 3959624 |
|---|
| End bp | 3960136 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644931060 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003087608 |
|---|
| Protein GI | 255036987 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.172906 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTCATTC AAACCGACAA ATCGTTTGAA GAACTCTACC ATCTGCATTG GGAAAAGGTA
TTTGCGGTAT GCTACCAGGG CACGCGCGAT GCCGGGCGGG CCGAGGATCT GATGCATGAA
ATCTTCCAGT CGGTATGGGA GCGGCGCGGT GAACTGCGCG TGCACGGCCC GGCGGCGCAT
TACCTCGTAC GCGCCGCAAA GCTCAAACTC CTGGCCTACC ACCGCGACAC GGCCAATCGA
AGGCAGATCA TTGACCAGAT CGTTGGCCAA AAAGCCGGAT TCGAGGAAAC CACCCAGCGC
CAGGTCGATT ACCAACTCCT TTCCGATCGC GTAATGGAGC TCGTGGCCGG CTTGCCGCAG
CCCTGCCAGG AGGTGTTTGT GATGAGCCGG CAGAAAGGCT TGTCCAACAA AGCCATTGCC
GCGTCGCTCG TTTTGTCCGA AAAAACCGTG GAATACCACC TCACACGCGC CTTGCGCTTC
CTCAGCAAGC AGCTCGCCGA ATACCAGCAT TAA
|
|---|
| Protein sequence | MLIQTDKSFE ELYHLHWEKV FAVCYQGTRD AGRAEDLMHE IFQSVWERRG ELRVHGPAAH
YLVRAAKLKL LAYHRDTANR RQIIDQIVGQ KAGFEETTQR QVDYQLLSDR VMELVAGLPQ
PCQEVFVMSR QKGLSNKAIA ASLVLSEKTV EYHLTRALRF LSKQLAEYQH
|
|---|
| |