Gene Dfer_3227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3227 
Symbol 
ID8226802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3955603 
End bp3956184 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content48% 
IMG OID644931056 
Productprotein of unknown function DUF820 
Protein accessionYP_003087604 
Protein GI255036983 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACGC CTGTTACATT CATTGTTGGA GATATCATGA GCGAGGACGA ATTCTTTCGT 
TTTTGCCAGA TGAACGATAC GCTCAACTTG GAGCGTGACA GCGAAGGCAA TATAATTTTT
ATGTCACCTG CGGGAAGTTT ATCTGACAAT CTTAGTTCCA AAATTCTTAT CGCGCTCGGT
TTATGGCTGG ATCAGCACGG TAATCCAGGT ATGGTGTTTG GCTCATCGGC TGGCTTCACG
CTTCCCAATG GCGCTGTCCG CTCGCCCGAC GTTGCCTGGG TTAACAGCCA AAGCTGGGAT
TCAATACCAG AGTCCGATCA GGAGCGATTC GCACCTGTCT GCCCAGATTT TGTGGTTGAA
GTGCGCTCGA AAACTGATAG CATATTTTAC TTGCAGGACA AAATGCAGGA ATACATGGCT
AATGGCTGTC GCCTTGCCTG GTTGATCGAC AAGTATGCGC AGAAAGCATA TGTTTATGAA
CCGGGTAAGT CTATCACTGA GCATTCGAGC CTTGATATCC AGCTGTCGGG GGAGCCTGTT
TTTCCAGGGT TTAACTTAGA TCTTGCGAAA ATAACCCGCT AA
 
Protein sequence
MDTPVTFIVG DIMSEDEFFR FCQMNDTLNL ERDSEGNIIF MSPAGSLSDN LSSKILIALG 
LWLDQHGNPG MVFGSSAGFT LPNGAVRSPD VAWVNSQSWD SIPESDQERF APVCPDFVVE
VRSKTDSIFY LQDKMQEYMA NGCRLAWLID KYAQKAYVYE PGKSITEHSS LDIQLSGEPV
FPGFNLDLAK ITR