Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3207 |
Symbol | |
ID | 8226782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 3926652 |
End bp | 3929765 |
Gene Length | 3114 bp |
Protein Length | 1037 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644931037 |
Product | acriflavin resistance protein |
Protein accession | YP_003087585 |
Protein GI | 255036964 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0543905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCT CAACACTTTC CATCAAAAGG CCGGTTCTCG CGATTGTGAT GAACCTGCTC ATCATATTGT TCGGGTTCCT GGGGTATAAA TTTCTGGGAA TGCGCGAATT CCCGTCGATC GACCCGCCCG TGGTCTCCAT TCGAACGAGC TACACCGGTG CCAATGCGGA CATCATCGAA TCGCAGATCA CCGAACCGCT GGAAAAGCAG CTGAACAGTA TCGAAGGCAT TAAATCCATC AGCTCCACCA GCAGCCAGGG AACGAGCCAG ATCACGGTGG AGTTCGACAT TGGCGTGGAT ATGGAACGTG CCGCGAACGA CGTGCGCGAT AAAGTAGGCT CGGCATCGCG GACATTGCCG CTGGATATTG ACGGCCCGCC GGTCGTAAGC AAAGCCGACG CAAACTCGGA GCCGATTATC GTGCTCACTT TCACCAGCAA CACCCGCTCG CACCTTGAAG TGAGCGACTA TGCGGAAAAC GTGATCGCCC AGCGCCTTCA AACGATCGAA GGTGTGAGCG AAATCCGCAT TTTCGGGCAA AAGAAATATG CGATGCGGAT CTGGATGGAC CCGGTTAAGA TGGCTGCGCT GGGCATTACC ACGCAGGATG TGAAAGTTGC GCTTGATAAG GAAAATGTGG AGCTGCCCAG CGGAAAACTG GCCGGCGATA ATACGGAGCT CACCGTAAAA ACCATCGGCC GGTTCCGTAC CGAGGAGGAT TTCAATGAAA TGATCATCAA GAACTCCGCC ACGCAGACGG TCCATCTGAA AGACATCGGT TCGGCGACGC TGGGCCCGGA AAACGAGGAG ACGATCCTGC GACTGGATAA TGTGCCGATG ATAGGTCTGG CGATTTCGCC GATGCCCGGC GCCAACTACC TCGACATTGC AAAGGAGGTC AACAAGCGCA TAGCCGCCAT CAAAAAGGAA CTTCCCAAAG ACTACGAACT GGACACGCTC ATCGACAACA CGATTTTCGT AGAACGTTCG ATCGAAGAAG TGGGCGAAAC CCTGCTGATC GCGATCGTGC TGGTGGTGAT CATCATCTAC CTGTTCTTCC GCGATTGGCT CATTGCATTC CGTCCGCTCA TTGATATACC CGTTTCGCTC ATTGGTACTT TCTTTATCAT GTACATCATG GGCTTTTCGG TGAACGTGCT CACGCTGCTC GCGATCGTGC TCGCAACCGG GCTGGTGGTC GATGACGGCA TTGTGGTTAC CGAAAACATT TTCAAGAAGA TCGAGCAGGG CATGAGCCCC ATCGAAGCCG CCATTAAGGG CTCGAACGAG ATCATTTTTG CCGTTTTATC CACATCCATT ACACTGGCTT CGGTTTTTTT GCCGGTTATT TTTATGGAAG GTTTTGTAGG AAAACTCTTC CGCGAGTTCG GTATCGTTAT TTCCGCCGCT GTATTGATTT CCGCTTTCGT ATCGCTCACG CTGACGCCCA TGCTGAATGC GTACCTGGTT CGCAAAACGC ACAAAAAGAG CTGGTTTTAC GAGAAAACAG AGCCATTTTT TGAAAAGATC ACCGCCAATT ACGGCAATGC ACTGGAGCGC TTTCTTAACA TGCGTTGGGC AGCGGTCCCG ATTGTGGCGG TTACGCTGGG TATGATCTGG TTTTTCGGGA AAGACCTGCA ATCCGAACTC GCTCCGCTGG ACGATCGCAA CTGGTTCAGG ATCAATATGA CAACACCGGA AGGTTCATCG TTCGAATTCA CCGATCGCTA TGTGCAGAAT GTAGGGAATA TGCTTATGGA CTCCATGCCG GGTAAAAAGG GCCTTATGCT CATCACCTCG CCGGGTAATT CTGGGCTTGG AGCGGCCAAT ACCGGCAGCG GGCGGATTGC GCTGGTAGAC AAGAAGTTCA GAAAGGAATC GCAGCAGGAG ATCGCCGATT ATATCAACAA AAAACTGAAA CTAATGCCCG ACGCCAAGTC GTTTGTCGTG CAACAGCAGA CGATCTCAGT CGATTCCCGC GGCGGTTTGC CCATTCAATA CGTCATTCAG GCACCCGATT TCGAGAAACT GAGGGAATAC CTGCCGAAAT TCATGGAAGA GGTGTCCAAC GACCCCACGT TTGCCATCAC CGACGTGAAC CTGAAATTCA GCAAGCCCGA AATTCAGATC ATGATCGATC GCGAGAAGGC GAAATCGCTT GGTGTATCGG TGCAGGATGT GGCGCAAACC ATGCAGCTCG CATTTGCAGG ACAGCGGTTT GGGTATTTCA CGATGAATGG CCGCCAGTAC CAGGTAATCG GGCAGTACGA TCGCGCAAAC CGCGACGAGC CGCTGGATTT GAAAAGCATG TTTGTCAAAA CAAATACCGG AAGTCTCGTG CAGCTGGATA ACATCGTGAG GGCCGAGGAA GAGAGCAGTC CGCCGCAGCT TTTTCACTAT AACCGCTACA TGAGCGCCAC CGTGCAGGCC GCTTTGGCAC CCGGCAAGAC GATCGGCGAC GGTATCGCGG CCATGGACCG TATCCGCGAT AAATTGAATG ACGAAACGAT CCAGACCGCA TTGAGCGGCT CGTCACGCGA TTATGCCGAG AGCTCATCCA ACACGATGTT CTCCTTCTTC CTGGCATTGG TGCTGATCTA TTTCATCCTT GCTGCGCAGT TCGAGAGCTT CGTCGATCCG TTCATTATCA TGTTCACCGT GCCGCTGGCG ATCGGCGGAG CGGTATTTTC GCTGTGGTTC TTCGATCAGA CCCTCAATAT TTTCAGCCAG ATCGGTATGA TTATGCTGAT TGGTCTGGTG ACCAAAAACG GTATTCTCAT CGTGGAGTTT GCCAATCAGC TGCGGGAGCA AGGGCGAAGT ATTCGGGAGG CGGCATTGGA GGCGGCAACG CTGCGTTTCA GGCCCATTCT TATGACGAGC CTTGCTACGA TCCTGGGCGC ATTGCCCATC GCGATGGCAT TGGGCTCGGC AGGCCGCAGC CGCATGTCGA TGGGGATCGT GATCATGGGA GGACTGCTGT TCTCACTCGT GCTGACGCTG TACGTCATTC CGGCCATTTA CACATTCTTC TCCCGGCCCA AAAACTTCGA GAAAATGAAA ATGATCGAAC GCGTCGCGCG GGACAGCGAA TTGGAAGAGC CAGCGCATTT TTGA
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Protein sequence | MSISTLSIKR PVLAIVMNLL IILFGFLGYK FLGMREFPSI DPPVVSIRTS YTGANADIIE SQITEPLEKQ LNSIEGIKSI SSTSSQGTSQ ITVEFDIGVD MERAANDVRD KVGSASRTLP LDIDGPPVVS KADANSEPII VLTFTSNTRS HLEVSDYAEN VIAQRLQTIE GVSEIRIFGQ KKYAMRIWMD PVKMAALGIT TQDVKVALDK ENVELPSGKL AGDNTELTVK TIGRFRTEED FNEMIIKNSA TQTVHLKDIG SATLGPENEE TILRLDNVPM IGLAISPMPG ANYLDIAKEV NKRIAAIKKE LPKDYELDTL IDNTIFVERS IEEVGETLLI AIVLVVIIIY LFFRDWLIAF RPLIDIPVSL IGTFFIMYIM GFSVNVLTLL AIVLATGLVV DDGIVVTENI FKKIEQGMSP IEAAIKGSNE IIFAVLSTSI TLASVFLPVI FMEGFVGKLF REFGIVISAA VLISAFVSLT LTPMLNAYLV RKTHKKSWFY EKTEPFFEKI TANYGNALER FLNMRWAAVP IVAVTLGMIW FFGKDLQSEL APLDDRNWFR INMTTPEGSS FEFTDRYVQN VGNMLMDSMP GKKGLMLITS PGNSGLGAAN TGSGRIALVD KKFRKESQQE IADYINKKLK LMPDAKSFVV QQQTISVDSR GGLPIQYVIQ APDFEKLREY LPKFMEEVSN DPTFAITDVN LKFSKPEIQI MIDREKAKSL GVSVQDVAQT MQLAFAGQRF GYFTMNGRQY QVIGQYDRAN RDEPLDLKSM FVKTNTGSLV QLDNIVRAEE ESSPPQLFHY NRYMSATVQA ALAPGKTIGD GIAAMDRIRD KLNDETIQTA LSGSSRDYAE SSSNTMFSFF LALVLIYFIL AAQFESFVDP FIIMFTVPLA IGGAVFSLWF FDQTLNIFSQ IGMIMLIGLV TKNGILIVEF ANQLREQGRS IREAALEAAT LRFRPILMTS LATILGALPI AMALGSAGRS RMSMGIVIMG GLLFSLVLTL YVIPAIYTFF SRPKNFEKMK MIERVARDSE LEEPAHF
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