Gene Dfer_3179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3179 
Symbol 
ID8226754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3888487 
End bp3889542 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content59% 
IMG OID644931009 
Productprotein of unknown function DUF323 
Protein accessionYP_003087557 
Protein GI255036936 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGGCC TGATGGCCGT GACGTTGCTA GGCTGCGAAA GCAAACAAAG CGCCGAGGAA 
AAGCGGAAAG CCGATAGCCT TGCTGCCTGC ATTGCCGATG GAATGCCCAC GCGCGCAGCG
GCGATCCGCA ATGCGAGCCA CGTAGCCGAA GGTGCAGGGG ATACCACGGA AATGGTGTGG
CTATCCGGCG GCAAGTTTCT GATGGGCGCC GACGAGTTCC CCGATTCGCG TCCCATGCAC
GAGGTGACTA TCAATGGATT TTACATGGAC GCCCACGAGG TGACCAACGC CGAATTCGCC
GCTTTTGTGA AAGCCACCAA CTATAAAACC GTAGCCGAAC GCCCGCTCAA CCCCGCGGAC
TACCCCGGCG TGCCGGCCGA CAAGCTGGTT CCGGGTTCGG CGGTGTTCAC GCCCACGCCA
ACGCGTGTGA GCCTGGACAA CCCGCTGCAA TGGTGGAATT ACGTGCCGGG AGCCAACTGG
GCCCATCCCG AAGGACCTTC CAGCTCGATC AAAGGACGTG AAAACTATCC GGTGGTGCAC
GTATCGTACG AAGATGCGGC CGCTTATGCC AAATGGGCCG GAAAAAGACT GCCTACCGAA
GCGGAATGGG AGTTTGCGGC GCAGGGCGGC AAGGGAAATC ATACCTATTA CTGGGGCGAG
GAACTGAAAC CGGGCGGTAA ATGGGTTGCC AATATTTACC AGGGCAGCTT TCCCGATAAA
AATACGAAAG AAGACGGCTA CCTCACCGCC GCGCCGATCC GCTCGTTCCC GGCCAATCCC
TATGGCCTCT ACGATATGGA CGGCAATGTG TGGGAATGGT GCGAGGACCT CTACCGGCCG
GATTACTATC AGAAAAGTCC GGGCGTGAAC CCAAGAGGCC CGTCTGACAG TTACGATCCC
GACGAGCCGG GAGCCGTGAA GCGCGTGCAG CGCGGCGGAT CGTTCCTGTG CAGCGACGAC
TATTGCATTC GCTACAAGGC GGGCAGCCGC GGAAAAGGAG AGGTGACCAG CGGCAGCAAC
AACCTCGGTT TCCGCTGTGT GATGGATAAA AAATGA
 
Protein sequence
MVGLMAVTLL GCESKQSAEE KRKADSLAAC IADGMPTRAA AIRNASHVAE GAGDTTEMVW 
LSGGKFLMGA DEFPDSRPMH EVTINGFYMD AHEVTNAEFA AFVKATNYKT VAERPLNPAD
YPGVPADKLV PGSAVFTPTP TRVSLDNPLQ WWNYVPGANW AHPEGPSSSI KGRENYPVVH
VSYEDAAAYA KWAGKRLPTE AEWEFAAQGG KGNHTYYWGE ELKPGGKWVA NIYQGSFPDK
NTKEDGYLTA APIRSFPANP YGLYDMDGNV WEWCEDLYRP DYYQKSPGVN PRGPSDSYDP
DEPGAVKRVQ RGGSFLCSDD YCIRYKAGSR GKGEVTSGSN NLGFRCVMDK K