| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3071 |
|---|
| Symbol | |
|---|
| ID | 8226645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 3751703 |
|---|
| End bp | 3752242 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644930902 |
|---|
| Product | Peptidylprolyl isomerase |
|---|
| Protein accession | YP_003087451 |
|---|
| Protein GI | 255036830 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0218212 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.576732 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA GGATACATTA TCCTTTTCTT TGTGTTATTA ATGCAAGGGC CCGCAGCGGC
CCTGCTTATC TTTCGTACCT CTTTATACTC ACTTTTGACA TGACAAAAGC GGAAATGATC
ACTGACAAGG GCACGATGCT CATCGAGTTT TACGATGAAG ATGCACCCAA TACAGTGAAA
AACTTTGTTG ATCTTTCTAA AAAAGGCTTT TACGACGGTG TGATTTTCCA CCGCGTTATC
CCTGACTTCG TGATCCAGGG CGGCGACCCT ACCGGCACCG GCCGTGGAGG TCCTGGCTAC
CACATTGATT GCGAACTTAC CGGCGGTAAC CAGTATCACG ACCGCGGCGT GCTTTCGATG
GCACACGCCG GCCGCAATAC CGGTGGCTCT CAGTTCTTCA TCTGCCACAG CCGCAACAAC
ACCGCGCACC TCGACAGGAA CCATACCTGC TTCGGCCGCG TGGTAGAAGG TGTGGAAACG
GTTGACGCGA TCCGCCAGGG CGACAAAATC CAGAAGATCA CGATCATCGA GGAAGCCTAA
|
|---|
| Protein sequence | MKKRIHYPFL CVINARARSG PAYLSYLFIL TFDMTKAEMI TDKGTMLIEF YDEDAPNTVK
NFVDLSKKGF YDGVIFHRVI PDFVIQGGDP TGTGRGGPGY HIDCELTGGN QYHDRGVLSM
AHAGRNTGGS QFFICHSRNN TAHLDRNHTC FGRVVEGVET VDAIRQGDKI QKITIIEEA
|
|---|
| |