| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3070 |
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| Symbol | |
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| ID | 8226644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3750896 |
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| End bp | 3751675 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644930901 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003087450 |
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| Protein GI | 255036829 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.32809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.422558 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAGAC TTATCTTTAT GGCCTTCTCA ATCGCAATAT TCGGCAAGAG TCCGGTGAGC
GAGGTGGAGG TGGAAAAGAA GGAGCTGAAA GAAACAACCA TCATTGATTC AGATCTTCTT
GCTATTGACT TCTGTGGCGA AGCCGTTCCA TTATCAGAGC TTCGAATCGC CGAGCGATAT
CAAAACATGA TCAGAAATTA CGACAACCCC ACTTTTCGTA AGCTGATGAC CACAACGAAA
AAGAGAATGC GGATCATCGA ACCCATTCTC AAGAAGTACG GAGTACCAGC CGATTTTAAG
TATATTCCAT TGATAGAGAG CGCCATGAAG GATGAGGTAA CGTCTCACCG CGGCGCAGGC
GGATACTGGC AACTGATGCC TTCCACCGCA AAATCTCTCG GGCTGGTTGT AAACGAAACC
AGGGACGACC GCAAACACTT AGTCAAATCG ACCCACGCCG CAGGCAAATA CCTGCGCGAC
TTGTATAAGC AACTGGGTTC CTGGACATTG GTAGCCGCTG CCTACAACGC AGGCCCGACG
CACATCCAGA ATAAAATGGA CGCGCAGAAC AAAGATGATT ATTTCAAACT CCGTCTCAAT
TCGGAGACTG CGAGGTACCT CTACAAGATC CTTGCCGTAA AAGAATGGTT CTCCAACCCC
GAAAGAAGCC GCGAATGGGT AAGCGGCGAC GTAGTCGACC GCCTTTCTGC ATTCAAGATC
GAGCAAAAGA AAGCCGCGGC ATTGGCAAAG GCTGAAACTG AGCCTAAGGC CGGGTCATAA
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| Protein sequence | MIRLIFMAFS IAIFGKSPVS EVEVEKKELK ETTIIDSDLL AIDFCGEAVP LSELRIAERY
QNMIRNYDNP TFRKLMTTTK KRMRIIEPIL KKYGVPADFK YIPLIESAMK DEVTSHRGAG
GYWQLMPSTA KSLGLVVNET RDDRKHLVKS THAAGKYLRD LYKQLGSWTL VAAAYNAGPT
HIQNKMDAQN KDDYFKLRLN SETARYLYKI LAVKEWFSNP ERSREWVSGD VVDRLSAFKI
EQKKAAALAK AETEPKAGS
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