Gene Dfer_3045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3045 
Symbol 
ID8226619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3724610 
End bp3725785 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content55% 
IMG OID644930876 
Productglutathionylspermidine synthase 
Protein accessionYP_003087425 
Protein GI255036804 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0754] Glutathionylspermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0629112 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAATC TTAAATCTTT ACCCAATCCG CCGCAGGCTG CATTGCAGAA AGCAGGCTGG 
GATTGGGCGC TCGGCACCGA CACGGCTCCT TATGTGGTGA ATGATATGGT GGTCGTAACC
GCGCAGCAAG CCGAGAGCTA CTACGAAGCC GCCGGTACAT TATACGATAT GCTGATCGAA
GCGGGCCAGC ATGCGATCGA CCACAATCTG CTGGGGAAAA TGGGTATCCC GGAAAACCTG
GCCGAGCTGA TCAGGCTCTC CTGGAACGAC GACCGGCAAA TTCATCTCTA CGGTCGTTTC
GACCTCGCGG GAGGCTTTGA CGACGAGCCT GTGAAACTCA TCGAGTTCAA TGCCGATACC
GCTACTTGCA TTCCTGAAAC GGCCGTAGTG CAATGGGCGC ACCTGCGCAT GAACGGCATG
GATGAATCGA ATCAGTTCAA CACCCTGTTC GAAACGCTGG TGGGCCAGTT TGTTTATTTG
AAAGAACAAA ACGCCGATCT GACGCCCTCG ATGCTGTTTT CGACCATGCG TGGCTATCCC
GAGGACGATA CCAATGTAGC CGTGCTCATG GAAGCTGCCA AAGAAGCGGG CTTCGACGTG
GAATTCACCT ATATCGACGA CGTAGAGTTT TCTAATGGCG AAGGGATTTT TTACCAGGAA
CCGGAGCACG GGCATTTCGT CCGGTTTGAT TACTGGTTCA AATTGGTGCC GTGGGAACAT
ATCGGTGCCG GCGAGCCGGA ATTGGCGGCT ATGCTTACGG AGATCGTGAA AAACAGGAAG
GCGGTTATCC TGAACCCGGC CTACACGTTG CTGTTTCAAT CCAAATACAT TCTTAACATC
CTGTGGGAGC TTTATCCCTA CCATCCGCTG CTGCTGGAAA CCGGCCCGCA TGCATTGCCC
GGCAAAAAAT CAGTAAGCAA AGTGCTGCTG GGCCGCGAGG GCGCCAATGT GGTGATCCAC
GACGAAAACG GCACGGCGCT GGAAGCAGCG GCGGGGGAGT ATGACGACCA GGCCCGTATT
TTCCAGGAGT ACACAGCCCT GCCGACGGAT GCAAGCGGCA GTACCTACCA GGCCGGTGTG
TTCTATGCCG GCGAGGCATG CGGATTGGGT TTTCGGAGAG GCGGGAAGAT TTTGGACAAC
ACCGCCCAAT TTGTGGGGCA TGTGGTGGAG GATTGA
 
Protein sequence
MVNLKSLPNP PQAALQKAGW DWALGTDTAP YVVNDMVVVT AQQAESYYEA AGTLYDMLIE 
AGQHAIDHNL LGKMGIPENL AELIRLSWND DRQIHLYGRF DLAGGFDDEP VKLIEFNADT
ATCIPETAVV QWAHLRMNGM DESNQFNTLF ETLVGQFVYL KEQNADLTPS MLFSTMRGYP
EDDTNVAVLM EAAKEAGFDV EFTYIDDVEF SNGEGIFYQE PEHGHFVRFD YWFKLVPWEH
IGAGEPELAA MLTEIVKNRK AVILNPAYTL LFQSKYILNI LWELYPYHPL LLETGPHALP
GKKSVSKVLL GREGANVVIH DENGTALEAA AGEYDDQARI FQEYTALPTD ASGSTYQAGV
FYAGEACGLG FRRGGKILDN TAQFVGHVVE D