| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3015 |
|---|
| Symbol | |
|---|
| ID | 8226588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 3687734 |
|---|
| End bp | 3689125 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644930845 |
|---|
| Product | bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase |
|---|
| Protein accession | YP_003087395 |
|---|
| Protein GI | 255036774 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
|---|
| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase
[TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000000287185 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAA AACAACAAAC CATTTCTAAG TCTGTATCCG TAACTGGAGT GGGTTTACAT
ACCGGTGTCG TGGCTACCAT GACATTCGTA CCGGCACCAG CCAACCACGG ATACAAGTTT
CAACGTGTTG ATTTACCCGA CCAGCCGATC GTCGATGCCG ATGTCGACAA TGTAGTGGAT
CTTTCGCGTG GTACCACCAT CGAACAGAAT GGCGCCAGAA TCCACACGGT GGAACATACA
CTGGCTGCGC TGGTGGGCTT GCAGATCGAC AACGTGCTGA TCCAGCTCGA TGGTCCCGAA
CCTCCGATCA TGGACGGCAG TTCGATCAAA TTCGTGGATG CGTTGCTCGA CGCCGGCATT
GAAGAACAGA ATGCATATCG CAACTATTTC GAAGTTCCGG AATACGTTCA TTATAAGAAT
AAAGATAAGG ATACCGAACT GGTGGCGTTG CCGCTTTCGG ACTATCGCCT CACGGTGATG
GTGGATTACA ACTCTACCGT CATCAGCAGC CAGCATGCTT CTTTGAATGA CATTACGCTT
TTCAAAGACG ATATCGCATC GTGCCGCACA TTCGTGTTCC TGCATGAGCT GGAAGCGCTG
TACAAGCAAA ACCTGATCAA AGGTGGTGAC CTCACCAATG CGATCGTGAT CGTAGACCGC
GAGGTGCGGG ATGGCGAGCT CGATCATCTG TCCCAGCTTT TGAATAAGCC GAAGGTGAGC
GTCGACAAAT CAAAAGGCAT TTTGAACAAT GTCGACCTGC ATTATCCCAA TGAAATGGCG
CGGCACAAGC TGCTCGACCT CATTGGTGAC CTGGCGCTGG TAGGCCGGCC TATCAAAGCA
CAGATCCTGG CCGCACGGCC GGGACATGCG GCGAATGTGG CTTTGGCGAA AAAGATCAAA
AAACTGATCA AATCAGGCAA GGGAGATATC CCGCAATACG ACCCGAACAA GGCGCCCGTA
TTCGATATCA ACCAGATAGG CCAGCTTCTG GCACACCGCT ATCCGTTCCA GATGATCGAC
AAAATCATCG CGCTGGACGA AAACAGCGTG GTAGGGGTGA AGAATGTGAC GATCAACGAA
CAATTTTTCC TAGGGCACTT TCCGGGTAAC CCGGTCATGC CGGGCGTCTT GCAACTGGAA
GCGATGGCCC AAACGGGCGG TATCCTGGTG CTTTCCAGCG TGCCCGATCC GGACAACTAC
TGGCCATACC TCATCGGCAT CGACGCGTGC CGGTTCCGCC GCAATGTTTT TCCGGGGGAT
ACAGTTATTT TTAAATGTGA ATTCACATCC CCGATGAAGC GGGGGATCGT CAAAATGAGT
GGCCGGGGAT ATGTAGCCGG ACAGCTGGTA TGTGAAGCGG ATATGATAGC AAGCCTGGTA
AAGAAAAAAT GA
|
|---|
| Protein sequence | MNEKQQTISK SVSVTGVGLH TGVVATMTFV PAPANHGYKF QRVDLPDQPI VDADVDNVVD
LSRGTTIEQN GARIHTVEHT LAALVGLQID NVLIQLDGPE PPIMDGSSIK FVDALLDAGI
EEQNAYRNYF EVPEYVHYKN KDKDTELVAL PLSDYRLTVM VDYNSTVISS QHASLNDITL
FKDDIASCRT FVFLHELEAL YKQNLIKGGD LTNAIVIVDR EVRDGELDHL SQLLNKPKVS
VDKSKGILNN VDLHYPNEMA RHKLLDLIGD LALVGRPIKA QILAARPGHA ANVALAKKIK
KLIKSGKGDI PQYDPNKAPV FDINQIGQLL AHRYPFQMID KIIALDENSV VGVKNVTINE
QFFLGHFPGN PVMPGVLQLE AMAQTGGILV LSSVPDPDNY WPYLIGIDAC RFRRNVFPGD
TVIFKCEFTS PMKRGIVKMS GRGYVAGQLV CEADMIASLV KKK
|
|---|
| |