Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3012 |
Symbol | |
ID | 8226585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 3684989 |
End bp | 3686017 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644930842 |
Product | metalloendopeptidase, glycoprotease family |
Protein accession | YP_003087392 |
Protein GI | 255036771 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0214979 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAATT TTGCGAATAT TTTCCACAGT ATGAATATCC TCGCCATTGA ATCGTCGTGC GACGAAACCT CCGCAGCTGT TATAACAAAC GGGAATATCC GCTCCAATGT TGTTGCTACG CAACTCATCC ACACCCATTA TGGTGGCGTC GTTCCCGAGC TGGCCTCGAG AGCCCATCAG CAACACATCC TGCCTGTGGT GGACAAAGCA CTGAATGACG CAAAAATAGC AAAAAAAGAC CTGGATGCCA TTGCTTTTAC CAAAGGACCC GGTTTGCTCG GTGCATTACT GGTGGGCACA TCGTTCGCCA AGTCGATGGC GCTTGGGCTG GATATTCCGC TGATCGAGAT CAATCACATG CAGGCACACG TGCTGGCGCA TTTCATCGAC GACCCCAAAC CGGCCTTCCC TTTCCTGTGC CTTACCGTGA GCGGCGGGCA CACGCAGATC GTGAAAGTTA CCGGCCCGCT CGAAATGGAA ATCATCGGCG AAACGCGCGA CGATGCCGTG GGGGAAGCTT TTGATAAAAC GGCCAAGCTG CTCGACCTGC CCTATCCCGG CGGTCCGCTC ATTGATAAAT ATGCCGCGCA GGGCAACCCG CAGGCTTATC CTTTTCCGCT ACCCGAAATG CCGGGGCTCG ATTTTTCGTT CAGCGGTATC AAAACGTCGT TTCTGTATTT TCTGCAAAAA CAGGTACGGC AGAATCCGGC GTTTGTGCAG GAAAACCTGG CCGACATCTG CGCCAGCATT CAGTTTACAC TTATTGATAT TCTGCTAAAA AAACTGAAAA AAGCATCGCG CGAAACGGGC ATTAAGGAGA TCGCCATCGC CGGAGGGGTT TCGGCTAATT CCGGCTTGCG CAGGTCGCTG ACCGAACTTG GCGCGCAGCT CGGGTGGAAT GTATATATTC CTGCTTTCGA ATATTGTACC GACAATGCGG CTATGATCGC CATTGCGGCG CATTTCAAAT TTGCGGCGGG CGATTTCTGC GACCAGACGG TCAGTCCGCT CGCGCGAATG GAGTTTTAA
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Protein sequence | MLNFANIFHS MNILAIESSC DETSAAVITN GNIRSNVVAT QLIHTHYGGV VPELASRAHQ QHILPVVDKA LNDAKIAKKD LDAIAFTKGP GLLGALLVGT SFAKSMALGL DIPLIEINHM QAHVLAHFID DPKPAFPFLC LTVSGGHTQI VKVTGPLEME IIGETRDDAV GEAFDKTAKL LDLPYPGGPL IDKYAAQGNP QAYPFPLPEM PGLDFSFSGI KTSFLYFLQK QVRQNPAFVQ ENLADICASI QFTLIDILLK KLKKASRETG IKEIAIAGGV SANSGLRRSL TELGAQLGWN VYIPAFEYCT DNAAMIAIAA HFKFAAGDFC DQTVSPLARM EF
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