Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2996 |
Symbol | |
ID | 8226569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 3661651 |
End bp | 3662640 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644930826 |
Product | TIM-barrel protein, nifR3 family |
Protein accession | YP_003087376 |
Protein GI | 255036755 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTAAGA TTGGAAATAT AGAACTGAGT GAATTTCCGT TGCTGCTCGC CCCGATGGAG GACGTGAGCG ACCCGCCGTT CCGCGCGGTG TGCAAGGAAA ACGGGGCCGA TTTGATGTAC ACCGAATTTG TGTCGTCCGA AGGGCTCATT CGTGATGCTG CCAAAAGCGT TCAGAAACTG GACATTTTTG AATATGAAAG ACCGGTCGGC ATCCAGCTGT TCGGTAGCGA TGTGGAAACG ATGGGCTCTT GCGCGGAGAT CGCCTCACGT GTGAATCCCG ACCTGATCGA CATCAATTAC GGATGCCCGG TGAAGAATGT CGCGTGCCGC GGTGCCGGCG CTGCATTGTT GCAGGACGTA CCGAAGATGG TCAAAATGAC CGAGTCGGTA ATTAAATCGA CGCATTTGCC GGTGACGGTC AAAACACGTC TCGGATGGGA TGATAACACC AAAAACATCC AGGAAGTGGC GGAGCGGTTG CAGGACATCG GGATCAAGGC ATTGTCCATT CACGGTCGCA CACGCGTACA GATGTACAAA GGCGCCGCCG ACTGGTCGCT CATTGCCAAA GTGAAGGAAA ACCCGCGCAT TACCATCCCT ATTTTTGGGA ATGGCGACGT GGATACGCCC GAGAAGGCAT TGGAATACAA AAATACCTAC GGCGTGGACG GCATCATGAT CGGCCGCGCG ACGATCGGCA ACCCGTGGAT CTTCAATGAG ATCAAGCATT ACCTCAAAAC CGGCGAAAAA CTGCCGCCGC CCACCATGGA GCAGCGCGTG GACGTCTGCC GCAGGCACCT CGAATTTTCG ATCCGCTGGA AAGGGCCGGT GGCCGGTGTT TTTGAAATGA GAAGGCACTA TACCAATTAT TTCAAAGGGC TGGAACACTT TAAGCCATAC AGAATGCGCC TGGTGGAAGC ACCTACATTC GACGAGCTCG ACAGCATCCT CAAAGAAATT TCGAACGATT ACAGTGAAAT GGTATGCTGA
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Protein sequence | MVKIGNIELS EFPLLLAPME DVSDPPFRAV CKENGADLMY TEFVSSEGLI RDAAKSVQKL DIFEYERPVG IQLFGSDVET MGSCAEIASR VNPDLIDINY GCPVKNVACR GAGAALLQDV PKMVKMTESV IKSTHLPVTV KTRLGWDDNT KNIQEVAERL QDIGIKALSI HGRTRVQMYK GAADWSLIAK VKENPRITIP IFGNGDVDTP EKALEYKNTY GVDGIMIGRA TIGNPWIFNE IKHYLKTGEK LPPPTMEQRV DVCRRHLEFS IRWKGPVAGV FEMRRHYTNY FKGLEHFKPY RMRLVEAPTF DELDSILKEI SNDYSEMVC
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