Gene Dfer_2962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2962 
Symbol 
ID8226535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3625334 
End bp3626197 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content51% 
IMG OID644930792 
Producthistidine kinase 
Protein accessionYP_003087342 
Protein GI255036721 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACA GTGAAGAACT GAAATGGGCA CTGCTGATTG CTTCCATGGC CATGCTGGCC 
ATGGCGTTTT GCATGATTGC GTTCGTGATG TATTACCAGA AGAAGCGCTT CGAGGAAGAA
AAGAAGATCA ACGACATTGA AAAAAATTAC AACCGACTCC TCCTCGATAC CGCGTTGAAC
TCCGAAGAAA CGGAACGAAG GCGGATTGCG CAGGATTTGC ACGACGATAT CGGCACAATG
CTCTCACTCA CCAAGCTTAG TCTCAATCAG TTGAGTAAAT TGGTAGCCAG CTCGGGGGAC
GAGAAAGAGG AAAGCATTAT GAAAAAGTCG CAGTCGCTCG TGGAAGAGAC CATCCTGCAC
GTGCGGCGCA TCACACGGGA CCTCGTACCC ACCACGCTCG AACGTTTCGG ACTGATGGAG
GCGATCGAGG AATTCATTCA CAAGCTGGAA GAGAACAACA ACCTGGTGAT CGCCTTTCAG
TCCAATACAG AAGAATTTCC GCGTCAGGGC CAGAAACTGG AACTGACGCT TTACCGCATT
ATGCAAGAGC TGGTGAACAA TGCGATTAAG CATGCCAGCT GCACAAAAAT CGATATTGTG
CTGGAAATCG ACGAAGAAAT GATAGGTTTG CGGGTTACCG ACGACGGCGT CGGCTTCGAC
CCTGAGAAAA TAAAGGAGAG CAACCTGGCC GGTCTCGGTC TGCTGGGAAT CGAAAGCCGG
CTGGCGATCG TGAACGGGAC CGTCCAATAT GAGCAACCGG CCAAGGGCGG TTCGAGCGCC
ATTGCGAGGA TTCCGGTCAA TCCGGCGTCC GGTAACAAAC CTGAACCTTT ACATCCATTC
CGCCGGGAGC GTGTGAATAT TTAA
 
Protein sequence
MQNSEELKWA LLIASMAMLA MAFCMIAFVM YYQKKRFEEE KKINDIEKNY NRLLLDTALN 
SEETERRRIA QDLHDDIGTM LSLTKLSLNQ LSKLVASSGD EKEESIMKKS QSLVEETILH
VRRITRDLVP TTLERFGLME AIEEFIHKLE ENNNLVIAFQ SNTEEFPRQG QKLELTLYRI
MQELVNNAIK HASCTKIDIV LEIDEEMIGL RVTDDGVGFD PEKIKESNLA GLGLLGIESR
LAIVNGTVQY EQPAKGGSSA IARIPVNPAS GNKPEPLHPF RRERVNI