| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2837 |
|---|
| Symbol | |
|---|
| ID | 8226410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 3501711 |
|---|
| End bp | 3502745 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644930667 |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_003087217 |
|---|
| Protein GI | 255036596 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.672578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.365252 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAAACCA TCACCATCAA GGATATTGCA AAGGCACTGA ACCTGTCGAC TTCGACGGTT
TCACGTGCAT TGAGAAATAG CTACGAGATT AACCCTGAGA CCAAGAAACT TGTAATGGAA
TACGCCGAGC GGATGAATTA CCGCCCGAAT CCCATTGCAC TGAGTTTGAA GGATAGTAAA
AGCAAGTCGA TCGGCGTGAT CATTCCCGAG ATCGCCAACC ATTTTTTCTC ACAACTCATC
AACGGCATCG AATCCATTGC TTACAACCTG GGTTACCATG TCGTGATTTT TCAGAGCCAC
GATTCCTACG AACGCGAAGT GGCGAATACC AACTATCTGG TTTCCAGGCG CGTGGATGGG
TTGTTGGTTT CGCTGGCAAG CCTTACTACT AACCTGGTGC ATTTTCAGGA ATTGATGGAG
AAAGGACTGC CGATCGTGTT CCTCGACCGC GTACCGAACG ATATCGAAAC GCACAAAGTC
GTTGCCGACA ATTTCACGGG CAGTTACGAG GCTACCGAGC ACCTGATCCT CTCGGGCCGA
AAGCGCATTG CGCATTTGAC GAGCCCTATC TACCTGTCTA TCACCACGGA ACGGCTGGCG
GGTTATAAAA AAGCATTGGA AGATTATGGC ATTCCATTCG ATGAATCTTA TGTGAAATAC
TGCCTTTACG GAGGCAAAAT CGAGGCTGAG AACGAGGCGG CGATCGAGGA AATGCTCAAC
CTGCCCGAGC CGCCGGACGC GATATTCACG GCCAGCGACC GGCTTACGAC CGGTTGCATG
TCGGTATTTC AAAGAAAGGG TATCCGGGTG CCGGAGGAGA TCGCAATCGT CGGTTTTACG
AACATCAGCG TTGCTGAGCT GCTGAACCCG CCGCTTACGA CCGTGATGCA GCCGGCCATG
GAAATGGGCC AGCAGGCTGT GGAACTCCTC ATCCGCCTGA TCGAACACCC GCAGAAAACC
GACCGTTTCG AAACGCGCTC GCTTAAAACT GCATTGACGA TCCGGGCGTC GTCTGTGGGA
AAAACCGTAG TTTAG
|
|---|
| Protein sequence | METITIKDIA KALNLSTSTV SRALRNSYEI NPETKKLVME YAERMNYRPN PIALSLKDSK
SKSIGVIIPE IANHFFSQLI NGIESIAYNL GYHVVIFQSH DSYEREVANT NYLVSRRVDG
LLVSLASLTT NLVHFQELME KGLPIVFLDR VPNDIETHKV VADNFTGSYE ATEHLILSGR
KRIAHLTSPI YLSITTERLA GYKKALEDYG IPFDESYVKY CLYGGKIEAE NEAAIEEMLN
LPEPPDAIFT ASDRLTTGCM SVFQRKGIRV PEEIAIVGFT NISVAELLNP PLTTVMQPAM
EMGQQAVELL IRLIEHPQKT DRFETRSLKT ALTIRASSVG KTVV
|
|---|
| |