| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2797 |
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| Symbol | |
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| ID | 8226370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3458901 |
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| End bp | 3459797 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644930627 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_003087177 |
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| Protein GI | 255036556 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.650693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.205647 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCAAA GCTACATTAA ACATTTTAAA AATTACCTCC GCCTCGAACG CTCGCTTTCC
GGCAACTCTG TGGAAGCCTA TGTGAGGGAT GTGGAAAAAC TGGAAGAATA TCTGGAATTG
AGCAAGGCCG ACCTCGCACC GGCGCGCGTG CAGGAGGAAC ATTTGTCGGC CTTCCTGAAA
TACATTGCCG AGCTGGGCCT CGCAGCACAT TCGCAGGCCC GGATGCTATC GGGCATCAAG
GCGTTTTTTA AATACCTTTT GCTGGAAAAC GAAATCACCG AAGACCCTAC GGAGCTGCTC
GAATCGCCAC GCCTGCCGCG CAAGCTGCCC GATGTGCTGT CTTACGAAGA AATTGAAACA
ATGCTGAGCG CCATCGACCA TTCCACTCCC GAAGGAACCC GAAACCGGGC GATTATGGAA
GTGCTCTACA GTTCGGGATT GCGCGTTTCG GAGCTAACGG ATTTGCAGCT CACCAATTGC
CATTTCGATA TTGGCTTCCT GCGGATTCTG GGGAAGGGTG ATAAAATGCG GCTGGTGCCC
ATCGGCAGAG AAGCCATTAA ATACACGCAA ATCTACCTCG ATCACATCCG AAATGACATC
GCGCCTCAGA AAGGGAGCGA GGATATTGTG TTTCTCAACC GGCGGGGCGG CCAGCTGTCG
CGGGTTATGA TTTTCCTGAT GATCAAGGAT ACAGCCGAAA AAGCGGGCAT CCACAAGAAC
GTGAGCCCGC ATACGTTCCG GCATTCGTTT GCGACGCACC TTATCGAAGG CGGCGCCAGC
CTGCGCGCGG TGCAGGAAAT GCTCGGACAT GAGTCGATTA CCACCACTGA AATTTACACA
CACCTCGACA GGGATTATCT GCGGCAGATC ATCACCGAGT TTCATCCGCG CAGCTAG
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| Protein sequence | MWQSYIKHFK NYLRLERSLS GNSVEAYVRD VEKLEEYLEL SKADLAPARV QEEHLSAFLK
YIAELGLAAH SQARMLSGIK AFFKYLLLEN EITEDPTELL ESPRLPRKLP DVLSYEEIET
MLSAIDHSTP EGTRNRAIME VLYSSGLRVS ELTDLQLTNC HFDIGFLRIL GKGDKMRLVP
IGREAIKYTQ IYLDHIRNDI APQKGSEDIV FLNRRGGQLS RVMIFLMIKD TAEKAGIHKN
VSPHTFRHSF ATHLIEGGAS LRAVQEMLGH ESITTTEIYT HLDRDYLRQI ITEFHPRS
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