| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2719 |
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| Symbol | |
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| ID | 8226291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3360488 |
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| End bp | 3363709 |
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| Gene Length | 3222 bp |
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| Protein Length | 1073 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644930548 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003087099 |
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| Protein GI | 255036478 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0834373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTAT TTCTGACGCA GCTGCACGCC CAGGATCTCG CCGTGACCGG TACGGTCACC
GCGGACGACG GCTCGATACT TCCGGGCGTG AACATTTCTT TGAAAGGTAC TACTCGCGGT
ACCACCACCG ATACCGACGG AAAGTACTCG ATATCGGCCG CTTCCGGCAC TACGCTCGTG
TTCAGTTTTA TCGGTTTCCA GAGCCAGGAA GTGGTTGTAG GCAGCCAGTC GGTGATCAAC
GTCTCCCTGA AAAACGATGT AAGCCAACTT CAGGAAGTAG TTGTAACCGC CCTTGGACAG
GAGCGGAAGC GCAATGAGCT CGTGTATGCA GCCCAGCAAA TCAATAATGA GCAGATCGTA
CAGGCACGTA ACCCGAACGT GATGAACTCG CTGGCAGGTA AAATTGCCGG TCTGGATATC
AAAACCAACA ATAACCTCGG TGGATCGACC AGCGCGGTGA TCCGTGGTTA CAAATCCATC
ACCGGTAACA ACCAGGCATT GTGGGTGATC GACGGCGTGC CGGTGACGAA CGCCAACAAC
AACTCGTCCG ACCAGCAGAC CGGCCGCTCC GGCACCGACT ACGGTAATGC CGCCTCCGAT
ATCAACCCGG ACAACATTGC CTCGGTGAAC GTGCTCAAAG GCGCCGCTGC GACAGCCCTC
TACGGCTCAC GCGCAGCCAA CGGGGTAATC CTCGTTACCA CCAAGCAAGG CCGCAAAAAC
AGCTTCGACG TGACCGTCAA CAGCGGCGTT ACCTGGGGCA AGATCGACAA AAGCACGTAT
GTGAAATACC AGAAAGAATA TGGAGCAGGT TATGGCGGCG ACGGCTCGGC CAACAAATTC
TACCGCGGTA ACCTGGGCTC AGGCGAAGGC GACATCGCGA TATTCGACGC CGATGCCTCT
TACGGAGCGA AATTCGATCC CAACAGAATG GTATACCAAT GGGATGCGCT TGACCCCTCG
TCGCCGACCT ATGGCCAGAT GACCCCCTGG GTAGCCGCCA AAAACGGCCC TGACGCATTC
TTCCAAACCG CAGTTACGTC CAACCAGAGC GTAAGCATCC TGGGCGGAGG CGAAAACACC
ACTTTCAAGG CCGGTTTTAC CCGCAGCGAC GAAAAAGGGG TGCTTCCGAA CAGTAAACTC
GGCAAAAACC TGTTCAACTT CTCGGCGTCG TTCGACCTGA CCAAGAAGCT GACGATCTCC
GCCAATGCGA ACTACTCGCA GGTGAAAGGC GTGGGCCGCT ACGGAACCGG TTATGACGGC
AAAAACCCTA ATCAGCAGTT CAGACAGTGG TTCCAGACGA ACGTCGACAT TCTCGAACAG
AAAGCTGCGT ATTTCAGGAA CAGACAGGAT GTAACCTGGA ACTGGGGCGA TCCGCGGGCG
CCATTCGATC AGAACGGCCC CATTTACTCC GAAAACCCAT ATTTCTCCCG CTACGAAAAC
TTCTCGAACG ACTCTCGTGA CAACTTCTTC GGCTATGCCG CGGCAGTTTA CAAAATCGCA
CCGTGGGTTG ACCTCACCAC GCGTTTCGCC TACAACGGCA CGCAGGATAT GCAGGAAGAG
CGCATTGCAT TCGGAAGCGC CGATCCGGCT CAGTACAAAC GCTTTAACAG AGGTTTCAAC
GAAACGAACC TCGACGTGAT CTTCAATTTC CGCAAAGCCA TTACGAAGGA TATCAACTTC
TCAGGTTTGG CGGGTGGAAG CATGCGCCGG TCGACTGAGA ACTCGATCCG GGCACAGACA
AACGGCGGAA TGGTTGTACC AGGGCTTTAT TCCCTCTCCA ACTCGGCCAA CCCGATCGAA
GCGCCTGTTG AAACTTACAG AAGAATCGGC GTGGACGGTT TGTATGCACA GGCTTCATTC
GGTTACAAAG ATCTCGTAAA CCTCGACCTG ACGGCGAGAC AAGACAAATC GACGACGCTT
AGCAAGGACA ACAACACCTA TTTCTATCCT GCAATCGGTG CCAACTTCAA CATTTCGAAC
CTGAATGCTT TGAAAAGCCT GGGCTGGCTC ACGATGGCGA AATTAAGCGC CAACTATGCC
GAAGTAGGTA ACGATGCGCC ATGGGGAAGC ACGATCGACG TGTACGACAA GCCAACGGGT
ATCGGCAATG TGCCTTACTT TACATTGAGA AATACCAAAA ACAACCCGGA CCTGAAACCG
GAAAGAACCA AAAGCTATGA ATTCGGTCTG GAAAGTGCAT TCCTGAACGA CCGCGTAGGC
TTCAACTTCA CCTATTACCG TTCATCTACG CTGGATCAGA TCCTGCCCGT TTCGATCACT
GCCGCTACCG GTTATGCATT CCGTTATGTC AACTCCGGTG AGGTACAAAA CAAGGGTATC
GAAATTTCCG CCTACGTAAC GCCGATCCGT GTGCAGGACT TCTCCTGGAC CGTGAATGTA
AACTTCGCAA GAAACCGCAA CAAGGTGATC AGCCTGTATG GTGAAGGCGA AACGGAGGTA
ACCAACGTTA CCATCGCCAG CTTGCAGGGC GGGGTGTCTA TCAACGCTGC CAAAGGCCAA
CCATTCGGTA TTATCCGCGG TACCAACTTC GTTTACCACG AAGGCACCGG CCAGAAAGTG
GTGAAAGCCA ATGGTATTTA TGCAGCGACT TCGAGCTCAG CCGAAATTAT CGGTAACCCC
AACCCCGACT GGATCGGAGG CGTGAGCAAT ACATTGAAAT ACAAAACACT CTCGCTGAGC
TTCCTGCTCG ACATCCGTCA CGGCGGCGAT GTGTGGTCAC TCGACCAATG GTATGGTGAA
GGAACGGGCC TTTACCCGAT CACAGCCGGC CTGAACGAAC TGGGCAATCC TAAAAGATCT
CCCGTTTCAG AAGGCGGCGG CGTGCTCTTC CCGGGTGTAC AAGCAGATGG AAGCCCTAAC
ACCGTGCGCG CGGCTAATGT GGACGGAAAC GGTGCTACTG CCTACGGCTA CCCAGGCAAC
CCGCCGAGAG CCATGTACAT CTACGACGCG AGCTATGTAA AATTGAGAGA AGTTGCCCTT
ACTTACGCAC TTCCGCAGGC GATCGTGAGC AAGCTGCGTG CATTCAAGCA GATCGACGTT
TCGCTGATCG GCCGTAACCT GTGGATTCTT CACAAAAACA TGGAATTCCA GGACCCGGAA
GAAGGCCTCG GCTCAGGACT GCTGAACGGC GCGGGCGGTT ACCAGAGCGG TGCTTACCCG
GCTGTAAGAA ACTATGGCTT CAATGTTAAA TTCCGTTTCT AA
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| Protein sequence | MLLFLTQLHA QDLAVTGTVT ADDGSILPGV NISLKGTTRG TTTDTDGKYS ISAASGTTLV
FSFIGFQSQE VVVGSQSVIN VSLKNDVSQL QEVVVTALGQ ERKRNELVYA AQQINNEQIV
QARNPNVMNS LAGKIAGLDI KTNNNLGGST SAVIRGYKSI TGNNQALWVI DGVPVTNANN
NSSDQQTGRS GTDYGNAASD INPDNIASVN VLKGAAATAL YGSRAANGVI LVTTKQGRKN
SFDVTVNSGV TWGKIDKSTY VKYQKEYGAG YGGDGSANKF YRGNLGSGEG DIAIFDADAS
YGAKFDPNRM VYQWDALDPS SPTYGQMTPW VAAKNGPDAF FQTAVTSNQS VSILGGGENT
TFKAGFTRSD EKGVLPNSKL GKNLFNFSAS FDLTKKLTIS ANANYSQVKG VGRYGTGYDG
KNPNQQFRQW FQTNVDILEQ KAAYFRNRQD VTWNWGDPRA PFDQNGPIYS ENPYFSRYEN
FSNDSRDNFF GYAAAVYKIA PWVDLTTRFA YNGTQDMQEE RIAFGSADPA QYKRFNRGFN
ETNLDVIFNF RKAITKDINF SGLAGGSMRR STENSIRAQT NGGMVVPGLY SLSNSANPIE
APVETYRRIG VDGLYAQASF GYKDLVNLDL TARQDKSTTL SKDNNTYFYP AIGANFNISN
LNALKSLGWL TMAKLSANYA EVGNDAPWGS TIDVYDKPTG IGNVPYFTLR NTKNNPDLKP
ERTKSYEFGL ESAFLNDRVG FNFTYYRSST LDQILPVSIT AATGYAFRYV NSGEVQNKGI
EISAYVTPIR VQDFSWTVNV NFARNRNKVI SLYGEGETEV TNVTIASLQG GVSINAAKGQ
PFGIIRGTNF VYHEGTGQKV VKANGIYAAT SSSAEIIGNP NPDWIGGVSN TLKYKTLSLS
FLLDIRHGGD VWSLDQWYGE GTGLYPITAG LNELGNPKRS PVSEGGGVLF PGVQADGSPN
TVRAANVDGN GATAYGYPGN PPRAMYIYDA SYVKLREVAL TYALPQAIVS KLRAFKQIDV
SLIGRNLWIL HKNMEFQDPE EGLGSGLLNG AGGYQSGAYP AVRNYGFNVK FRF
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