Gene Dfer_2714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2714 
Symbol 
ID8226286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3352392 
End bp3353741 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content55% 
IMG OID644930543 
Productamidohydrolase 
Protein accessionYP_003087094 
Protein GI255036473 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTC TTTCTACCAA AAGCATTTCC AGATTAGCCC TCCAAATCTC CGCGACGGCG 
CTGATCGCCG CAATACCCAG CCTGTCGGCA CGCGCGCAGT CACCATTGGC CAAATCGATC
GATCAAAAAT CGCCGGCATT GGAAAAAAAG CTGGTCGAAT GGCGACGCGA TTTTCACCAG
AACCCAGAAC TCGGCAACAG AGAGTTTAAA ACCGCCGAAA AGGTGGCCAA TCATTTGAAA
CAGCTGGGCA TTGAAGTACA AACGGGCGTG GCGCATACCG GGGTTGTAGG GCTGCTCAAA
GGCGGCAAAC CCGGCCCTGT GGTGGCATTG CGGGCCGATA TGGACGGGCT GCCGGTGACC
GAGCGCGTGG ATGTACCTTT TAAATCACAA GTTACAACCG AATACAACGG ACAAACTACG
GGCGTAATGC ACGCCTGCGG GCACGATACG CACGTGGCAA TCCTGATGGG CGTGGCAGAA
GTGCTGGCGT CGATGAAAAG CGAACTTCCG GGCACGGTCA AGTTCATATT CCAGCCTGCG
GAAGAAGGTG CGCCGCAAGG CGAGGAGGGA GGCGCCGAGC TGATGGTAAA AGAGGGCGTG
CTCGAAAATC CGAAAGTCGA GGCGATATTC GGGCTGCATA TCGATTCGCA GATCGAAGTC
GGCAAGATTG CCTACCGGCC CGGCGCGACG ATGGCGGCGG TCGATTTTTT CAGTATTGAT
GTGAAAGGGA AACAGACGCA CGGCGCTTAC CCGTGGTCGG GCGTTGACCC GATTGTGACG
TCGTCGCAGA TCGTGACTGC ACTGCAAACC ATCGTAAGCC GCAACCTCAA CCTCACGCAG
GCACCGGCTG TGGTGACCAT CGGTGCCATC CACGGCGGCG TGCGGCAGAA TATCATCCCC
GAATCGGTGA AAATGATCGG CACGATCCGG ACTTTTGACG AGGGAATGCA CTCATTTGTA
CACAAGCGCA TTAACGACAT ATCGACCAAC ATTGCCGAAA GTGCCGGTGC CACGGCCAAA
GTGGATATCG ATGTCATGTA CCCGGTTACC TATAACGACG AGGCGCTGAC GGCCAAAATG
ATCGGTACGC TCGAAAATGT GGCTGGAAAA GAGCAGGTGA ATGTGATTCC GGCGAAAACC
GGCGCCGAAG ACTTTTCATA TTACCAGCAA AAAGTGCCGG GTTTCTTCTT CTTTCTGGGA
GGAATGCCGA AGGGTAAAAA GGTGTCGGAA GCGGCCCCGC ACCACACGCC CGACTTCTAT
GTGGACGAGG GCAGTCTTGT GCTCGGTGTG CGGTCCATCG CGCGGCTAGC CACCGATTAC
CTCGAAAAGG CGAAAACGAA AGCGAAGTAA
 
Protein sequence
MKILSTKSIS RLALQISATA LIAAIPSLSA RAQSPLAKSI DQKSPALEKK LVEWRRDFHQ 
NPELGNREFK TAEKVANHLK QLGIEVQTGV AHTGVVGLLK GGKPGPVVAL RADMDGLPVT
ERVDVPFKSQ VTTEYNGQTT GVMHACGHDT HVAILMGVAE VLASMKSELP GTVKFIFQPA
EEGAPQGEEG GAELMVKEGV LENPKVEAIF GLHIDSQIEV GKIAYRPGAT MAAVDFFSID
VKGKQTHGAY PWSGVDPIVT SSQIVTALQT IVSRNLNLTQ APAVVTIGAI HGGVRQNIIP
ESVKMIGTIR TFDEGMHSFV HKRINDISTN IAESAGATAK VDIDVMYPVT YNDEALTAKM
IGTLENVAGK EQVNVIPAKT GAEDFSYYQQ KVPGFFFFLG GMPKGKKVSE AAPHHTPDFY
VDEGSLVLGV RSIARLATDY LEKAKTKAK