| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2607 |
|---|
| Symbol | |
|---|
| ID | 8226179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 3216432 |
|---|
| End bp | 3219026 |
|---|
| Gene Length | 2595 bp |
|---|
| Protein Length | 864 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644930438 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003086989 |
|---|
| Protein GI | 255036368 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA TAACCCTGCT AATACCCGTT TTACTGAACA TTCTGACCGT TCTTCCGGCC
CCGGCCCAAC AGGGTGCGCA ACGGACGTCC GTGAAAGCGC TGGCCAATAA TTCCGTACGC
GTGCAATGGC GCGAAACGGA CGGTGCCATG AAAATCGAAG AGGTATCGGT GAACAAAAAA
GGCCAATGGA GTAAGCTCGC GGCACCGTCC GGCGAGTACA CGCTGCTTTA TTCAGAAACC
AAACCTTCGA CCGAATCAGC CGAAACATTT GAAAAAATCA CCGGTGGAAA ATTCCCGGAA
GACGCCTACC ATTACCAGCA GGTGCAATGG AAAGAAAGCA CCACCGGCGT GGCATTGAAC
ACCGCCGGCA AGGCCATCCA CTTTTTCCCG AAAACCGGCG AAGCGAAAGA CAATGGCCTG
GAATTCAAAT CCGAAACCGA CGTCGCGAAC GTCACCGCGC ATTGGAAACT CGACCCGCGC
TTCCCGAACG ACGTGCTGGT AACCCTTACG TTGCAGGCTA AAAAGCAGGG TTTCTTCTCG
CTGGCGACGC CTACTTTGGC CGCACTGCCC GTGGAGCAGA TGAGCTGGGT GTCGGTGCCG
GGCTATTTTC AGGGGAATTT TATGCAAAAG AACTTTGCAT TGGCCTATGC TTACGGCCAC
GGCGTGCCCG ACCGCCCGGC GGTGTACCGC GAACGTTGTG CGTCTACATT AAGTCCGCTT
GTCAGCAACA AGGACGGCAT TACCTGGTCG GTGGTGCCGG AGCCCGGTCT CGCGCGTGAC
CCGTGGGCGA AGGACCAGAT CACGCAGATA GACTGGCACC TGGGGCTCTC GCATATGAAC
CGCAAGGCGC AGCTCTCGCC TACCTTATAT TACCCCGTGC TGGGAGAAGA CAAGTCCGAA
ATGCAGGCCG GGCAGTCGGT TTCCTACACC TTTAGGTACA GCATGATCGC CGGCGACTGG
TTCGAGGCGA CCAAGCACGC GGCCATTGAC ATATACAAAT TCCGCGAAAC ACTCGCACTC
CGCCAGAGCA AACAGGCGCT CACCGACCGC ATCGAGAAAA TGCACCATTA CCTCACCGAC
CCTAAAACGT CGCTGTGGAA CATCGAGGAA TTCAAAGGCA AGCAAATCGG CGCCCAATCG
TACCTCGGCG GTGTGGTAGG CTCGAACAAG GATGCCATGA AAAACTCGGA TTACGGCGCG
ATGTGGATGC TTGCCAATGC CACCAATGAT CCGGAACTGA CCGAAAAAGT GCTTCCTCCC
GCCGAGAACT TCAAACTTGT GCAGCAGCAA ACCGACGAAG GTTTTTTCAA AGGTGCCGTG
GAAGGCCAGT ATTATTTAGC CAAAAAGAAA ACATTCGTAG AAGAATGGGG TGAGGTGGTG
GAACCCATCG CGCTGACCTA CTATGTGATG CTCGATGTGG GCAATATGCT GCTTTTCGAG
CCGGATAATG CCGAATTGAA GGAACGCCTC AAACTAGGCG CCGAGAAACT GCTCAGCTGG
CAGCGCCAGG ACGGCAGCTT TGCCGTTGCG TACGACCGCA AAACCGAGCA GGAAATTTTC
AAGGACATTC AGGATGTGCG GCCTACATTT TACGGGTTAA TCGTCGCACA CCGGATTCTC
AAAGACGAGA AATACCTCAA AGCCGCCGAA AAAGGAGCCG ACTGGTTCCT GAAAAACGCC
GTGCAAACCG GTGCCTTCCT GGGCGTGTGC GGAGACGCGC GCTACGCCCC CGATTTTGCC
ACAGGCCAGT CGGCACAGGC ATTGCTGGAT TTGTTTGATT TAACCCAAAA CAAAAAATAC
CAGGAAGCGG CCGTGACCTG CGCGAAAATT TACACCTCAT CCATTTACAC GCACCCCATA
GCCGATCGCC AGCCCAAAAC GGTGAACGGA ACGGCGCGGG AGGATTGGGA GATCAGCCAA
ACAGGCCTCA GCTTCGAGCA TGGCGGCATT TTCGGTTCGG CAACGCGGCA CGGACCTATC
CAGCTTGCGA GTCACGCCGG ACTGTTCATC CGCATTTACC AGCTCACCGG CGAGCAGCTT
TTTGCCGATA TGGCCCGCGC TGCCGCCATT GGCCGCGATG CGTTTGTGGA TAGCAAAACT
TCCGTGGCAT CCTACTATTG GAACGCCATG AACCGCGGCG CCGGCCCCTA CCCGCACCAC
GCGTGGTGGC AGGTGGGCTG GATCACCGAT TACCTGCTTT CGGAAGCGGC ATTGCGTTCG
AATGGCAAAG TTTCGTTCCC GCGCGGCTTC GTAACACCGA AAGTGGGCCC GCACCAAACG
TACGGTTTCG CGCCGGGCGA GGTGTTCGGC GACAAAGCGA ACCTGATAAT CCGGGAAGGC
TTTGCAGTAG CCGACAGCCC GTCCATCGAC CCGATCATTT CAAAATCGAC CACCAAAAAC
ATTTACTACA TCACGCTGCT CAACAACAGC CCGCAGCCGA CGGCCTTCAA CCTCAAAATC
GACCACAACA AAATATCCGA AAATAACCCG CCCGTAACCA TAAAATGGGC CGAAACGAAC
CAGAAAGCGG CCATTACCAA TATCAAACTG CCGGCATTCG GTAGCAGAAC GTTGGTTTTA
AGCTATAAGC TTTAG
|
|---|
| Protein sequence | MKRITLLIPV LLNILTVLPA PAQQGAQRTS VKALANNSVR VQWRETDGAM KIEEVSVNKK
GQWSKLAAPS GEYTLLYSET KPSTESAETF EKITGGKFPE DAYHYQQVQW KESTTGVALN
TAGKAIHFFP KTGEAKDNGL EFKSETDVAN VTAHWKLDPR FPNDVLVTLT LQAKKQGFFS
LATPTLAALP VEQMSWVSVP GYFQGNFMQK NFALAYAYGH GVPDRPAVYR ERCASTLSPL
VSNKDGITWS VVPEPGLARD PWAKDQITQI DWHLGLSHMN RKAQLSPTLY YPVLGEDKSE
MQAGQSVSYT FRYSMIAGDW FEATKHAAID IYKFRETLAL RQSKQALTDR IEKMHHYLTD
PKTSLWNIEE FKGKQIGAQS YLGGVVGSNK DAMKNSDYGA MWMLANATND PELTEKVLPP
AENFKLVQQQ TDEGFFKGAV EGQYYLAKKK TFVEEWGEVV EPIALTYYVM LDVGNMLLFE
PDNAELKERL KLGAEKLLSW QRQDGSFAVA YDRKTEQEIF KDIQDVRPTF YGLIVAHRIL
KDEKYLKAAE KGADWFLKNA VQTGAFLGVC GDARYAPDFA TGQSAQALLD LFDLTQNKKY
QEAAVTCAKI YTSSIYTHPI ADRQPKTVNG TAREDWEISQ TGLSFEHGGI FGSATRHGPI
QLASHAGLFI RIYQLTGEQL FADMARAAAI GRDAFVDSKT SVASYYWNAM NRGAGPYPHH
AWWQVGWITD YLLSEAALRS NGKVSFPRGF VTPKVGPHQT YGFAPGEVFG DKANLIIREG
FAVADSPSID PIISKSTTKN IYYITLLNNS PQPTAFNLKI DHNKISENNP PVTIKWAETN
QKAAITNIKL PAFGSRTLVL SYKL
|
|---|
| |